Gene omics information

Query gene ID Contig15767_at
Gene name
Organism Hordeum vulgare


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.9198.1Contig15767_atContig15767--1e-1At1g21520unknown proteinS.X.H.G.
0.8092.5Contig6235_s_atContig6235--1e+0At3g27850RPL12-C (ribosomal protein l12-c)S.X.H.G.
0.6784.7Contig6238_s_atContig6238--1e-7At2g30860ATGSTF9 (GLUTATHIONE S-TRANSFERASE PHI 9)S.X.H.G.
0.6178.7Contig6233_s_atContig6233--3e-8At5g08790ATAF2S.X.H.G.
0.3240.3Contig3365_atContig3365--2e-85At1g09100RPT5B (26S proteasome AAA-ATPase subunit RPT5B)S.X.H.G.
0.2326.1Contig145_atContig145--4e-10At1g08880H2AXAS.X.H.G.
Click here to hide the above table.


Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
19.299.7GSM238432Embryo 0 h; Seed germination; Rep 1GSE9365Expression data from barley maturing and germinating grains
17.499.6GSM238430Embryo 25DAF; Seed development; Rep 1GSE9365Expression data from barley maturing and germinating grains
16.999.6GSM238433Embryo 0 h; Seed germination; Rep 2GSE9365Expression data from barley maturing and germinating grains
16.399.6GSM238431Embryo 25DAF; Seed development; Rep 2GSE9365Expression data from barley maturing and germinating grains
12.899.4GSM238434Embryo 24 h; Seed germination; Rep 1GSE9365Expression data from barley maturing and germinating grains
10.999.2GSM282041Control_dryseed_Morex_rep2GSE11200Expression data from malting barley seeds
9.599.0GSM238428Embryo 16DAF; Seed development; Rep 1GSE9365Expression data from barley maturing and germinating grains
9.499.0GSM282025Control_dryseed_Morex_rep1GSE11200Expression data from malting barley seeds
7.098.4GSM282035Malting_day4_Morex_rep1GSE11200Expression data from malting barley seeds
6.398.1GSM238438Embryo 72 h; Seed germination; Rep 1GSE9365Expression data from barley maturing and germinating grains
Click here to hide the above table.


Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.021e-240Contig9764_atContig9764--7e+0At4g13140-C.G.S.X.
0.025e-238Contig19205_atContig19205--7e+0At4g32020unknown proteinC.G.S.X.
0.025e-238Contig5175_atContig5175--4e-11At5g19855unknown proteinC.G.S.X.
0.032e-136HVSMEg0015B10r2_atHVSMEg0015B10r2--3e-1At1g07950surfeit locus protein 5 family protein / SURF5 family proteinC.G.S.X.
0.022e-136Contig8023_atContig8023--8e-50At5g55990CBL2 (CALCINEURIN B-LIKE 2)C.G.S.X.
0.022e-136Contig12522_atContig12522--4e-11At3g04880DRT102 (DNA-DAMAGE-REPAIR/TOLERATION 2)C.G.S.X.
0.028e-134Contig6797_atContig6797--7e+0At4g19980unknown proteinC.G.S.X.
0.028e-134Contig25015_atContig25015--4e-1At5g22555unknown proteinC.G.S.X.
0.028e-134Contig16057_atContig16057--2e+0At5g01530chlorophyll A-B binding protein CP29 (LHCB4)C.G.S.X.
Click here to hide the above table.



Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.041e-138Arabidopsis thalianaAt1g21520838752unknown proteinF:molecular_function unknown;P:response to oxidative stress, response to salt stress;C:endoplasmic reticulum;P---C.G.S.X.
0.046e-136Glycine maxGmaAffx.22286.1.S1_atBU551302--4e-6At5g65300unknown proteinC.G.S.X.
0.355e-42173Oryza sativaOs04g0577800AU182546-Protein of unknown function UPF0136 family protein4e-1At2g22170lipid-associated family proteinC.G.S.X.
0.042e+034Populus trichocarpaPtpAffx.220712.1.S1_atpmrna37128hypothetical protein-1e+0At3g30430F-box family proteinC.G.S.X.
0.562e-86319Triticum aestivumTaAffx.132043.1.S1_atCA636120--2e-1At3g62990unknown proteinC.G.S.X.
0.031e-136Vitis vinifera1618633_atCF568894--7e-14At1g650604CL3C.G.S.X.
0.326e-60230Zea maysZm.3426.1.A1_atBM269425protein kinase-6e+0At3g04500RNA recognition motif (RRM)-containing proteinC.G.S.X.
Click here to hide the above table.


Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
Click here to hide the above table.


Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
Click here to hide the above table.



Back to the CoP portal site

Back to the KAGIANA project homepage