Gene omics information

Query gene ID Contig15729_at
Gene name
Organism Hordeum vulgare


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.9198.1Contig15729_atContig15729--3e-2At3g11280myb family transcription factorS.X.H.G.
0.8394.0Contig7120_atContig7120--4e-18At1g55880pyridoxal-5'-phosphate-dependent enzyme, beta family proteinS.X.H.G.
0.7187.1Contig7301_atContig7301--3e-1At5g26070hydroxyproline-rich glycoprotein family proteinS.X.H.G.
0.6784.7Contig327_s_atContig327--2e-2At2g23310ATRER1C1S.X.H.G.
0.6178.7Contig4455_atContig4455--5e-1At5g05370ubiquinol-cytochrome C reductase complex ubiquinone-binding protein, putative / ubiquinol-cytochrome C reductase complex 8.2 kDa protein, putativeS.X.H.G.
0.5066.9Contig3480_atContig3480--4e-1At5g16660unknown proteinS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
75.3100.0GSM238417Endosperm 16DAF; Seed development; Rep 2GSE9365Expression data from barley maturing and germinating grains
71.6100.0GSM238419Endosperm 25DAF; Seed development; Rep 2GSE9365Expression data from barley maturing and germinating grains
46.199.9GSM238418Endosperm 25DAF; Seed development; Rep 1GSE9365Expression data from barley maturing and germinating grains
21.999.8GSM440980Stressed seed_Rep3GSE17669Gene expression in the barley spike during drought stress
21.399.7GSM238416Endosperm 16DAF; Seed development; Rep 1GSE9365Expression data from barley maturing and germinating grains
19.499.7GSM419982Seed_Rep2GSE16754Comparative transcriptional profiling of organs of the barley spike
19.499.7GSM440976Control seed_Rep2GSE17669Gene expression in the barley spike during drought stress
16.599.6GSM440979Stressed seed_Rep2GSE17669Gene expression in the barley spike during drought stress
15.399.6GSM419983Seed_Rep3GSE16754Comparative transcriptional profiling of organs of the barley spike
15.399.6GSM440977Control seed_Rep3GSE17669Gene expression in the barley spike during drought stress
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.152e-2099Contig12811_atContig12811--3e-5At5g01200myb family transcription factorC.G.S.X.
0.065e-1581Contig6946_atContig6946--1e-5At5g01200myb family transcription factorC.G.S.X.
0.115e-1581Contig15670_atContig15670--5e-1At2g38090myb family transcription factorC.G.S.X.
0.075e-1271Contig5771_atContig5771--1e-2At5g58900myb family transcription factorC.G.S.X.
0.113e-756Contig14119_atContig14119--3e-5At1g49010myb family transcription factorC.G.S.X.
0.033e-446HZ42B13r_atHZ42B13r--9e-1At4g1432060S ribosomal protein L36a/L44 (RPL36aB)C.G.S.X.
0.031e-344Contig4306_s_atContig4306--6e+0At4g38740ROC1 (ROTAMASE CYP 1)C.G.S.X.
0.024e-342Contig20989_atContig20989--1e-1At5g47330palmitoyl protein thioesterase family proteinC.G.S.X.
0.024e-342Contig17301_atContig17301--1e-2At1g28280VQ motif-containing proteinC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.033e-240Arabidopsis thalianaAt3g11280820299myb family transcription factorPutative transcription factors interacting with the gene product of VHA-B1 (vacuolar ATPase subunit B1; as shown through yeast two-hybrid assay).---C.G.S.X.
0.042e-448Glycine maxGma.593.3.S1_a_atCA801787MYB transcription factor MYB173 /// MYB transcription factor MYB176-6e-12At1g74840myb family transcription factorC.G.S.X.
0.363e-44180Oryza sativaOs05g0442400AK107134.1-Transcription factor MYBS32e+0At5g04760myb family transcription factorC.G.S.X.
0.032e-138Populus trichocarpaPtpAffx.105756.1.S1_atBP931825hypothetical protein-2e+0At3g16350myb family transcription factorC.G.S.X.
0.487e-99361Triticum aestivumTaAffx.23509.1.S1_atCA734150--1e+0Atmg01350-C.G.S.X.
0.034e-238Vitis vinifera1613486_atCF215097hypothetical protein LOC100253576-1e-20At1g70000DNA-binding family proteinC.G.S.X.
0.208e-63240Zea maysZm.18132.1.S1_atCN844872--2e-1At5g58900myb family transcription factorC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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