Gene omics information

Query gene ID	Contig15721_at
Gene name
Organism	Hordeum vulgare

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.80	92.5	Contig15721_at	Contig15721	-	-	1e+0	At5g59360	unknown protein	S.X.	H.G.	Please select
0.91	98.1	Contig24429_at	Contig24429	-	-	2e+0	At5g39220	hydrolase, alpha/beta fold family protein	S.X.	H.G.	Please select
0.83	94.0	Contig21626_at	Contig21626	-	-	4e+0	At5g59440	ZEU1 (ZEUS1)	S.X.	H.G.	Please select
0.80	92.5	HT11N18r_s_at	HT11N18r	-	-	1e+0	At1g16025	unknown protein	S.X.	H.G.	Please select
0.44	58.9	Contig14721_at	Contig14721	-	-	5e+0	At4g15670	glutaredoxin family protein	S.X.	H.G.	Please select
0.42	55.2	Contig9101_s_at	Contig9101	-	-	7e+0	At5g23930	mitochondrial transcription termination factor-related / mTERF-related	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
12.1	99.3	GSM238410	Pericarp 8DAF; seed development; Rep 1	GSE9365	Expression data from barley maturing and germinating grains
11.2	99.2	GSM261022	ABA-Control-rep2	GSE10328	ABA experiment
10.0	99.1	GSM261027	ABA-Late-rep1	GSE10328	ABA experiment
9.9	99.1	GSM160819	38% SWC rep1	GSE6990	Barley drought stress
9.1	98.9	GSM261028	ABA-Late-rep2	GSE10328	ABA experiment
8.4	98.8	GSM161221	cold treatment rep3	GSE6993	Barley low temperature stress
8.4	98.8	GSM160464	drought control rep1	GSE6990	Barley drought stress
7.9	98.7	GSM261025	ABA-Early-rep2	GSE10328	ABA experiment
7.8	98.6	GSM161220	cold treatment rep2	GSE6993	Barley low temperature stress
7.4	98.5	GSM160823	19% SWC rep1	GSE6990	Barley drought stress

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.06	4e-5	48	Contig8760_at	Contig8760	-	-	3e-3	At2g42610	LSH10 (LIGHT SENSITIVE HYPOCOTYLS 10)	C.G.	S.X.	Please select
0.04	4e-2	38	EBes01_SQ003_E04_at	EBes01_SQ003_E04	-	-	2e-1	At4g30800	40S ribosomal protein S11 (RPS11B)	C.G.	S.X.	Please select
0.02	4e-2	38	Contig6221_at	Contig6221	-	-	2e+0	At1g80245	-	C.G.	S.X.	Please select
0.03	1e-1	36	Contig9911_s_at	Contig9911	-	-	2e+1	At5g54215	-	C.G.	S.X.	Please select
0.02	1e-1	36	Contig4803_at	Contig4803	-	-	1e-20	At5g53400	nuclear movement family protein	C.G.	S.X.	Please select
0.03	1e-1	36	Contig2456_at	Contig2456	-	-	7e+0	At3g06019	unknown protein	C.G.	S.X.	Please select
0.02	6e-1	34	Contig15873_at	Contig15873	-	-	3e+0	At3g43490	zinc knuckle (CCHC-type) family protein	C.G.	S.X.	Please select
0.02	6e-1	34	Contig201_at	Contig201	-	-	2e-34	At1g09200	histone H3	C.G.	S.X.	Please select
0.03	6e-1	34	Contig19861_at	Contig19861	-	-	6e-3	At5g15360	unknown protein	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.03	1e+0	34	Arabidopsis thaliana	At5g59360	836055	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.04	1e-1	38	Glycine max	PsAffx.CL94Contig1_at	PsAffx.CL94Contig1	-	-	5e+0	At2g31090	unknown protein	C.G.	S.X.	Please select
0.12	8e-25	115	Oryza sativa	Os09g0524800	AK105833.1	-	Apoptosis regulator Bcl-2 protein, BAG domaincontaining protein	3e-1	At5g40630	ubiquitin family protein	C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.03	1e-1	38	Populus trichocarpa	PtpAffx.49598.1.A1_s_at	CV278478	-	-	5e-3	At3g54210	ribosomal protein L17 family protein	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.28	2e-107	389	Triticum aestivum	TaAffx.3170.1.S1_at	CK212729	-	-	2e-1	At1g32270	ATSYP24	C.G.	S.X.	Please select
0.04	1e+0	32	Vitis vinifera	1622734_at	CF214685	hypothetical protein LOC100248095	-	4e-9	At1g52760	esterase/lipase/thioesterase family protein	C.G.	S.X.	Please select
0.04	3e-5	48	Zea mays	Zm.17599.1.A1_at	CK370802	protein binding protein	-	7e+0	At5g24660	LSU2 (RESPONSE TO LOW SULFUR 2)	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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