CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Contig15712_s_at

Gene name

Organism Hordeum vulgare

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.77 90.8 Contig15712_s_at Contig15712 - - 7e-3 At1g22360 AtUGT85A2 (UDP-glucosyl transferase 85A2) S.X. H.G.
0.15 14.1 EBro01_SQ001_I18_at EBro01_SQ001_I18 - - 3e+0 At2g40085 unknown protein S.X. H.G.
0.05 4.1 AFFX-BioDn-3_at - - - 0 S.X. H.G.
0.02 1.8 Contig21310_at Contig21310 - - 1e-1 At5g24250 unknown protein S.X. H.G.
0.02 1.8 HZ49P22r_s_at HZ49P22r - - 9e-1 At5g42825 unknown protein S.X. H.G.
0.01 1.1 Contig13852_at Contig13852 - - 2e+0 At5g16470 zinc finger (C2H2 type) family protein S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
45.6 99.9 GSM431546 pathogen isolates: Mock - rep1 GSE17238 Response of barley roots during the host interaction with the plasmodiophorid virus vector Polymyxa graminis
42.3 99.9 GSM431550 pathogen isolates: Polymyxa graminis - rep2 GSE17238 Response of barley roots during the host interaction with the plasmodiophorid virus vector Polymyxa graminis
32.3 99.9 GSM431547 pathogen isolates: Mock - rep2 GSE17238 Response of barley roots during the host interaction with the plasmodiophorid virus vector Polymyxa graminis
26.0 99.8 GSM431548 pathogen isolates: Mock - rep3 GSE17238 Response of barley roots during the host interaction with the plasmodiophorid virus vector Polymyxa graminis
24.7 99.8 GSM431573 pathogen isolates: Polymyxa betae - rep3 GSE17240 Response of barley roots during the non-host interaction with the plasmodiophorid virus vector Polymyxa betae
23.9 99.8 GSM431569 pathogen isolates: Mock inoculated control - rep2 GSE17240 Response of barley roots during the non-host interaction with the plasmodiophorid virus vector Polymyxa betae
18.1 99.7 GSM431549 pathogen isolates: Polymyxa graminis - rep1 GSE17238 Response of barley roots during the host interaction with the plasmodiophorid virus vector Polymyxa graminis
17.8 99.7 GSM431551 pathogen isolates: Polymyxa graminis - rep3 GSE17238 Response of barley roots during the host interaction with the plasmodiophorid virus vector Polymyxa graminis
17.8 99.7 GSM431570 pathogen isolates: Mock inoculated control - rep3 GSE17240 Response of barley roots during the non-host interaction with the plasmodiophorid virus vector Polymyxa betae
17.4 99.6 GSM431572 pathogen isolates: Polymyxa betae - rep2 GSE17240 Response of barley roots during the non-host interaction with the plasmodiophorid virus vector Polymyxa betae
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
1.00 0 1620 Contig15712_at Contig15712 - - 7e-3 At1g22360 AtUGT85A2 (UDP-glucosyl transferase 85A2) C.G. S.X.
0.67 0 730 Contig14081_at Contig14081 - - 1e-1 At1g22340 AtUGT85A7 (UDP-glucosyl transferase 85A7) C.G. S.X.
0.71 8e-149 525 Contig21253_at Contig21253 - - 2e+1 At5g17165 unknown protein C.G. S.X.
0.15 6e-20 97 HS16J06u_at HS16J06u - - 2e+1 At5g59950 RNA and export factor-binding protein, putative C.G. S.X.
0.20 4e-12 71 Contig9397_at Contig9397 - - 2e-4 At1g22370 AtUGT85A5 (UDP-glucosyl transferase 85A5) C.G. S.X.
0.18 4e-12 71 EBro02_SQ001_G03_s_at EBro02_SQ001_G03 - - 8e-1 At5g39730 avirulence-responsive protein-related / avirulence induced gene (AIG) protein-related C.G. S.X.
0.18 4e-12 71 EBro02_SQ001_G03_at EBro02_SQ001_G03 - - 8e-1 At5g39730 avirulence-responsive protein-related / avirulence induced gene (AIG) protein-related C.G. S.X.
0.09 2e-10 65 HV12J05u_at HV12J05u - - 1e+0 At3g52360 unknown protein C.G. S.X.
0.11 2e-10 65 Contig11709_at Contig11709 - - 3e-3 At1g22360 AtUGT85A2 (UDP-glucosyl transferase 85A2) C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.04 7e-3 42 Arabidopsis thaliana At1g22360 838843 AtUGT85A2 (UDP-glucosyl transferase 85A2) F:UDP-glycosyltransferase activity, transferase activity, transferring glycosyl groups, glucuronosyltransferase activity;P:metabolic process;C:cellular_component unknown;PMVBOF - - - C.G. S.X.
0.06 2e-3 44 Glycine max GmaAffx.59500.3.S1_at BG790368 - - 2e+0 At5g57181 unknown protein C.G. S.X.
0.35 1e-55 218 Oryza sativa Os.47907.1.S1_at - - - 0 C.G. S.X.
0.05 2e-4 48 Populus trichocarpa Ptp.1148.2.S1_at CK089838 hypothetical protein - 2e-1 At1g78270 AtUGT85A4 (UDP-glucosyl transferase 85A4) C.G. S.X.
0.60 5e-93 341 Triticum aestivum TaAffx.37305.1.A1_at BJ286678 - - 1e+0 At3g46640 PCL1 (PHYTOCLOCK 1) C.G. S.X.
0.04 2e-3 42 Vitis vinifera 1611804_at CF513259 hypothetical protein LOC100252436 - 1e-1 At2g16890 UDP-glucoronosyl/UDP-glucosyl transferase family protein C.G. S.X.
0.54 4e-98 357 Zea mays Zm.6272.1.A1_at AY111701.1 - - 4e-2 At1g22360 AtUGT85A2 (UDP-glucosyl transferase 85A2) C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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