Gene omics information

Query gene ID Contig15475_at
Gene name
Organism Hordeum vulgare


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.9198.1Contig15475_atContig15475--4e-2At4g20860FAD-binding domain-containing proteinS.X.H.G.
0.6077.3Contig18135_atContig18135--2e+0At5g67300MYBR1 (MYB DOMAIN PROTEIN R1)S.X.H.G.
0.6077.3Contig13383_atContig13383--1e-8At2g48010RKF3 (RECEPTOR-LIKE KINASE IN IN FLOWERS 3)S.X.H.G.
0.5774.9Contig10688_atContig10688--8e+0At5g65430GRF8 (GENERAL REGULATORY FACTOR 8)S.X.H.G.
0.4458.9Contig10689_atContig10689--3e-10At2g40360transducin family protein / WD-40 repeat family proteinS.X.H.G.
0.2427.2HX05P09r_atHX05P09r--9e-1At5g60350unknown proteinS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
28.799.9GSM146367Maythorpe Root Salt, biological rep 2GSE6325Array-based genotyping and expression analysis of barley cv. Maythorpe and Golden Promise
21.399.7GSM71141OWB-D stress replicate 3GSE3170 Barley single feature polymorphisms and drought stress gene expression
16.899.6GSM71140OWB-D stress replicate 2GSE3170 Barley single feature polymorphisms and drought stress gene expression
16.199.6GSM71139OWB-D stress replicate 1GSE3170 Barley single feature polymorphisms and drought stress gene expression
12.899.4GSM382234Root_Hg3GSE15295Mercury toxicity in barley roots
11.799.3GSM146363Maythorpe Root Control, biological rep1GSE6325Array-based genotyping and expression analysis of barley cv. Maythorpe and Golden Promise
11.599.3GSM382232Root_Hg1GSE15295Mercury toxicity in barley roots
10.899.2GSM431550pathogen isolates: Polymyxa graminis - rep2GSE17238Response of barley roots during the host interaction with the plasmodiophorid virus vector Polymyxa graminis
10.499.2GSM431551pathogen isolates: Polymyxa graminis - rep3GSE17238Response of barley roots during the host interaction with the plasmodiophorid virus vector Polymyxa graminis
10.399.1GSM238439Embryo 72 h; Seed germination; Rep 2GSE9365Expression data from barley maturing and germinating grains
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.078e-1167Contig14427_atContig14427--1e-2At2g34790MEE23 (MATERNAL EFFECT EMBRYO ARREST 23)C.G.S.X.
0.078e-1167Contig12286_s_atContig12286--2e-5At4g20820FAD-binding domain-containing proteinC.G.S.X.
0.078e-1167Contig12286_atContig12286--2e-5At4g20820FAD-binding domain-containing proteinC.G.S.X.
0.075e-652HY03O05u_atHY03O05u--4e+0At5g40330MYB23 (MYB DOMAIN PROTEIN 23)C.G.S.X.
0.071e-344Contig12855_atContig12855--7e+0At5g65070MAF4 (MADS AFFECTING FLOWERING 4)C.G.S.X.
0.022e-240Contig17391_atContig17391--2e+0At3g56220transcription regulatorC.G.S.X.
0.022e-240Contig14397_atContig14397--5e-1At3g52105unknown proteinC.G.S.X.
0.068e-238Contig14589_atContig14589--8e+0At4g15417ATRTL1 (ARABIDOPSIS THALIANA RNASEIII-LIKE 1)C.G.S.X.
0.013e-136Contig7560_atContig7560--5e-53At2g39930ISA1 (ISOAMYLASE 1)C.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.044e-240Arabidopsis thalianaAt4g20860827834FAD-binding domain-containing proteinF:electron carrier activity, oxidoreductase activity, FAD binding, catalytic activity;P:response to cyclopentenone;C:endomembrane system;BFPOAM---C.G.S.X.
0.052e-138Glycine maxGmaAffx.27935.1.A1_atBI971150--2e-1At1g30760FAD-binding domain-containing proteinC.G.S.X.
0.142e-861Oryza sativaOs06g0548200AK105176.1-FAD linked oxidase, N-terminal domain containingprotein4e-3At1g26420FAD-binding domain-containing proteinC.G.S.X.
0.054e-654Populus trichocarpaPtpAffx.54313.2.S1_atBU895504hypothetical protein-6e-4At2g34790MEE23 (MATERNAL EFFECT EMBRYO ARREST 23)C.G.S.X.
0.590906Triticum aestivumTa.19477.1.S1_atCK199531--2e-1At1g30740FAD-binding domain-containing proteinC.G.S.X.
0.033e-652Vitis vinifera1613586_atCF513392hypothetical protein LOC100245607-2e-3At4g20830FAD-binding domain-containing proteinC.G.S.X.
0.409e-66250Zea maysZm.9216.1.A1_atBM267379hypothetical protein LOC100276794-9e-2At5g44380FAD-binding domain-containing proteinC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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