Gene omics information

Query gene ID Contig1519_s_at
Gene name
Organism Hordeum vulgare


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.7388.7Contig1519_s_atContig1519--3e-2At4g19100unknown proteinS.X.H.G.
0.6178.7Contig11773_atContig11773--4e+0At4g34150C2 domain-containing proteinS.X.H.G.
0.5066.9Contig14741_atContig14741--2e+0At5g65960unknown proteinS.X.H.G.
0.2935.5Contig10144_s_atContig10144--1e-13At1g52510hydrolase, alpha/beta fold family proteinS.X.H.G.
0.1514.1Contig4782_s_atContig4782--4e-1At5g11950protein homodimerizationS.X.H.G.
0.054.1Contig4991_s_atContig4991--1e-9At1g79440ALDH5F1S.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
4.296.3GSM261051Bonus Control rep2GSE10332Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1
4.096.0GSM31124928-4_without_aphids_1GSE12584Microarray analysis of the interaction between Rhopalosiphum padi and partially resistant or susceptible barley lines
3.895.7GSM261050Bonus Control rep1GSE10332Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1
3.194.1GSM281747Genotype: Steptoe - rep3GSE11182Steptoe x Morex seedling leaf comparison
3.093.8GSM281749Genotype: Morex - rep2GSE11182Steptoe x Morex seedling leaf comparison
2.993.4GSM281745Genotype: Steptoe - rep1GSE11182Steptoe x Morex seedling leaf comparison
2.893.1GSM398269HS41-1_3d_rep3GSE15970Differentially Expressed Genes between Drought-tolerant and Drought-sensitive Barley Genotypes
2.893.1GSM281750Genotype: Morex - rep3GSE11182Steptoe x Morex seedling leaf comparison
2.792.7GSM372975genotype: 11542 - pathogen isolates: 5874 - time: 0 - rep2GSE14930Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene
2.792.7GSM398267HS41-1_3d_rep1GSE15970Differentially Expressed Genes between Drought-tolerant and Drought-sensitive Barley Genotypes
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.224e-58222Contig1529_atContig1529--3e-24At3g61470LHCA2C.G.S.X.
0.091e-42171Contig1521_atContig1521--6e-2At2g31840-C.G.S.X.
0.021e-238Contig7441_atContig7441--7e-39At3g57150NAP57 (Arabidopsis thaliana homologue of NAP57)C.G.S.X.
0.016e-236Contig6034_atContig6034--1e-3At5g05140transcription elongation factor-relatedC.G.S.X.
0.066e-236EBpi05_SQ001_F13_atEBpi05_SQ001_F13--2e-1At2g29125RTFL2 (ROTUNDIFOLIA LIKE 2)C.G.S.X.
0.046e-236Contig12125_atContig12125--6e+0At3g07522unknown proteinC.G.S.X.
0.036e-236Contig17501_atContig17501--3e-2At5g67520adenylylsulfate kinase, putativeC.G.S.X.
0.042e-134HI02N08u_s_atHI02N08u--4e-3At4g19100unknown proteinC.G.S.X.
0.042e-134HI02N08u_atHI02N08u--4e-3At4g19100unknown proteinC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.053e-238Arabidopsis thalianaAt4g191002745715unknown proteinF:molecular_function unknown;P:biological_process unknown;C:chloroplast, membrane;MOBFPV---C.G.S.X.
0.024e-238Glycine maxPsAffx.C187000008_atPsAffx.C187000008--2e-1At3g13227serine-rich protein-relatedC.G.S.X.
0.071e-344Oryza sativaOs07g0577600AK070051.1-Lhca2 protein2e-11At3g61470LHCA2C.G.S.X.
0.052e-136Populus trichocarpaPtpAffx.65682.3.S1_atCV238309--1e-15At2g24260basic helix-loop-helix (bHLH) family proteinC.G.S.X.
0.134e-26117Triticum aestivumTa.28697.3.S1_atCK211399--8e-25At3g61470LHCA2C.G.S.X.
0.041e-134Vitis vinifera1621077_s_atCB975305hypothetical protein LOC100256381-2e-17At3g51880HMGB1 (HIGH MOBILITY GROUP B 1)C.G.S.X.
0.068e-132Zea maysZm.6246.2.A1_atAI677558--9e-7At2g22080unknown proteinC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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