Gene omics information

Query gene ID	Contig15087_at
Gene name
Organism	Hordeum vulgare

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.91	98.1	Contig15087_at	Contig15087	-	-	8e-3	At5g14390	-	S.X.	H.G.	Please select
0.83	94.0	Contig17040_at	Contig17040	-	-	2e-2	At3g60490	AP2 domain-containing transcription factor TINY, putative	S.X.	H.G.	Please select
0.80	92.5	Contig15086_at	Contig15086	-	-	6e-4	At5g40570	surfeit locus protein 2 family protein / SURF2 family protein	S.X.	H.G.	Please select
0.73	88.7	Contig1924_at	Contig1924	-	-	3e-1	At4g25020	KOW domain-containing protein / D111/G-patch domain-containing protein	S.X.	H.G.	Please select
0.63	80.3	Contig15990_at	Contig15990	-	-	7e+0	At2g14910	unknown protein	S.X.	H.G.	Please select
0.44	58.9	Contig2704_s_at	Contig2704	-	-	9e-1	At5g47175	LCR3 (Low-molecular-weight cysteine-rich 3)	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
5.7	97.7	GSM382236	Root_Control2	GSE15295	Mercury toxicity in barley roots
5.5	97.6	GSM382235	Root_Control1	GSE15295	Mercury toxicity in barley roots
5.0	97.2	GSM372967	genotype: Mla6 - pathogen isolates: K1 - time: 20 - rep3	GSE14930	Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene
4.8	97.0	GSM419978	Awn_Rep1	GSE16754	Comparative transcriptional profiling of organs of the barley spike
4.8	97.0	GSM440969	Control awn_Rep1	GSE17669	Gene expression in the barley spike during drought stress
4.4	96.6	GSM382232	Root_Hg1	GSE15295	Mercury toxicity in barley roots
4.2	96.3	GSM372966	genotype: Mla6 - pathogen isolates: K1 - time: 20 - rep2	GSE14930	Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene
4.2	96.3	GSM372946	genotype: Mla6 - pathogen isolates: 5874 - time: 16 - rep3	GSE14930	Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene
3.9	95.8	GSM382237	Root_Control3	GSE15295	Mercury toxicity in barley roots
3.8	95.7	GSM373001	genotype: 11542 - pathogen isolates: K1 - time: 20 - rep1	GSE14930	Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.37	6e-76	284	Contig18580_at	Contig18580	-	-	8e-16	At5g14390	-	C.G.	S.X.	Please select
0.02	9e-1	34	Contig5990_at	Contig5990	-	-	2e+0	At4g26670	mitochondrial import inner membrane translocase subunit Tim17/Tim22/Tim23 family protein	C.G.	S.X.	Please select
0.01	4e+0	32	Contig10761_at	Contig10761	-	-	9e-16	At2g35620	FEI2 (FEI 2)	C.G.	S.X.	Please select
0.01	4e+0	32	Contig1797_x_at	Contig1797	-	-	1e-19	At3g10340	PAL4 (Phenylalanine ammonia-lyase 4)	C.G.	S.X.	Please select
0.02	4e+0	32	Contig9991_at	Contig9991	-	-	9e-6	At1g04250	AXR3 (AUXIN RESISTANT 3)	C.G.	S.X.	Please select
0.02	4e+0	32	HVSMEh0085D01r2_at	HVSMEh0085D01r2	-	-	4e+0	At4g21920	unknown protein	C.G.	S.X.	Please select
0.01	4e+0	32	Contig6606_at	Contig6606	-	-	5e+0	At5g09920	NRPB4	C.G.	S.X.	Please select
0.01	4e+0	32	Contig1797_at	Contig1797	-	-	1e-19	At3g10340	PAL4 (Phenylalanine ammonia-lyase 4)	C.G.	S.X.	Please select
0.01	1e+1	30	Contig22698_at	Contig22698	-	-	1e-1	At5g40855	unknown protein	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.15	8e-3	42	Arabidopsis thaliana	At5g14390	831290	-	F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;OBMPFV	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.10	1e-5	52	Glycine max	GmaAffx.86591.1.S1_at	BF596657	-	-	2e-17	At4g24760	unknown protein	C.G.	S.X.	Please select
0.45	7e-165	581	Oryza sativa	Os02g0190800	AK099853.1	-	Esterase/lipase/thioesterase domain containingprotein	4e-15	At5g14390	-	C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.19	4e-24	113	Populus trichocarpa	PtpAffx.200988.1.S1_at	pmrna1946	hypothetical protein	-	3e-86	At5g14390	-	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.61	0	1453	Triticum aestivum	Ta.30013.1.S1_at	CK213051	-	-	1e-18	At5g14390	-	C.G.	S.X.	Please select
0.04	9e-3	40	Vitis vinifera	1609490_s_at	CK138152.1	hypothetical protein LOC100267319	-	6e-9	At4g24760	unknown protein	C.G.	S.X.	Please select
0.18	6e-11	67	Zea mays	Zm.985.1.A1_at	BE638902	esterase/lipase/thioesterase	-	5e+0	At4g33610	glycine-rich protein	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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