Gene omics information

Query gene ID	Contig15056_at
Gene name
Organism	Hordeum vulgare

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.90	95.7	Contig15056_at	Contig15056	-	-	3e-17	At1g20380	prolyl oligopeptidase, putative / prolyl endopeptidase, putative / post-proline cleaving enzyme, putative	S.X.	H.G.	Please select
0.29	35.5	Contig11405_at	Contig11405	-	-	2e-9	At1g65930	isocitrate dehydrogenase, putative / NADP+ isocitrate dehydrogenase, putative	S.X.	H.G.	Please select
0.22	24.2	Contig11385_at	Contig11385	-	-	3e+0	At5g47290	myb family transcription factor	S.X.	H.G.	Please select
0.21	22.6	Contig7765_at	Contig7765	-	-	5e-55	At4g34450	coatomer gamma-2 subunit, putative / gamma-2 coat protein, putative / gamma-2 COP, putative	S.X.	H.G.	Please select
0.14	12.9	Contig16032_at	Contig16032	-	-	9e+0	At5g55570	unknown protein	S.X.	H.G.	Please select
0.13	11.6	Contig10970_at	Contig10970	-	-	2e-10	At4g00290	mechanosensitive ion channel domain-containing protein / MS ion channel domain-containing protein	S.X.	H.G.	Please select
0.13	11.6	Contig6123_at	Contig6123	-	-	3e+0	At5g24105	AGP41 (ARABINOGALACTAN-PROTEIN 41)	S.X.	H.G.	Please select
0.10	8.4	HA16J16r_at	HA16J16r	-	-	1e+0	At4g31840	plastocyanin-like domain-containing protein	S.X.	H.G.	Please select
0.09	7.4	Contig9785_at	Contig9785	-	-	9e-4	At4g25620	hydroxyproline-rich glycoprotein family protein	S.X.	H.G.	Please select
0.05	4.1	Contig13948_at	Contig13948	-	-	6e-10	At1g14300	binding	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
56.8	100.0	GSM398273	Moroc9-75_0d_rep1	GSE15970	Differentially Expressed Genes between Drought-tolerant and Drought-sensitive Barley Genotypes
53.6	100.0	GSM398283	Moroc9-75_5d_rep3	GSE15970	Differentially Expressed Genes between Drought-tolerant and Drought-sensitive Barley Genotypes
45.3	99.9	GSM398249	Martin_0d_rep1	GSE15970	Differentially Expressed Genes between Drought-tolerant and Drought-sensitive Barley Genotypes
42.0	99.9	GSM398251	Martin_0d_rep3	GSE15970	Differentially Expressed Genes between Drought-tolerant and Drought-sensitive Barley Genotypes
35.6	99.9	GSM398250	Martin_0d_rep2	GSE15970	Differentially Expressed Genes between Drought-tolerant and Drought-sensitive Barley Genotypes
31.3	99.9	GSM398275	Moroc9-75_0d_rep3	GSE15970	Differentially Expressed Genes between Drought-tolerant and Drought-sensitive Barley Genotypes
29.0	99.9	GSM398274	Moroc9-75_0d_rep2	GSE15970	Differentially Expressed Genes between Drought-tolerant and Drought-sensitive Barley Genotypes
12.5	99.4	GSM398278	Moroc9-75_1d_rep3	GSE15970	Differentially Expressed Genes between Drought-tolerant and Drought-sensitive Barley Genotypes
11.6	99.3	GSM398281	Moroc9-75_5d_rep1	GSE15970	Differentially Expressed Genes between Drought-tolerant and Drought-sensitive Barley Genotypes
8.4	98.8	GSM398282	Moroc9-75_5d_rep2	GSE15970	Differentially Expressed Genes between Drought-tolerant and Drought-sensitive Barley Genotypes

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.06	6e-4	44	HVSMEm0004M18r2_at	HVSMEm0004M18r2	-	-	2e+0	At3g09970	calcineurin-like phosphoesterase family protein	C.G.	S.X.	Please select
0.06	6e-4	44	HVSMEm0004M18r2_x_at	HVSMEm0004M18r2	-	-	2e+0	At3g09970	calcineurin-like phosphoesterase family protein	C.G.	S.X.	Please select
0.05	4e-2	38	EBro03_SQ003_L03_at	EBro03_SQ003_L03	-	-	7e-1	At1g61097	Expressed protein	C.G.	S.X.	Please select
0.02	2e-1	36	Contig15263_at	Contig15263	-	-	7e-3	At2g23320	WRKY15	C.G.	S.X.	Please select
0.03	2e-1	36	HV05A02u_at	HV05A02u	-	-	1e+0	At4g01925	DC1 domain-containing protein	C.G.	S.X.	Please select
0.03	2e-1	36	HV05A02u_s_at	HV05A02u	-	-	1e+0	At4g01925	DC1 domain-containing protein	C.G.	S.X.	Please select
0.02	2e-1	36	Contig11249_at	Contig11249	-	-	1e-2	At1g28640	GDSL-motif lipase, putative	C.G.	S.X.	Please select
0.02	2e-1	36	Contig10786_at	Contig10786	-	-	1e-2	At3g09070	glycine-rich protein	C.G.	S.X.	Please select
0.06	2e-1	36	rbags14a14_s_at	rbags14a14	-	-	5e-3	At1g58120	unknown protein	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.09	3e-17	89	Arabidopsis thaliana	At1g20380	838626	prolyl oligopeptidase, putative / prolyl endopeptidase, putative / post-proline cleaving enzyme, putative	F:serine-type peptidase activity, serine-type endopeptidase activity;P:proteolysis;C:cellular_component unknown;OBMPAF	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.05	2e-3	44	Glycine max	HgAffx.22253.1.S1_at	BI396827	-	-	3e+0	At5g38860	BIM3 (BES1-interacting Myc-like protein 3)	C.G.	S.X.	Please select
0.20	1e-82	307	Oryza sativa	Os04g0561500	AK065953.1	-	Prolyl endopeptidase (EC 3.4.21.26) (Post-prolinecleaving enzyme) (PE)	1e-19	At1g76140	serine-type endopeptidase/ serine-type peptidase	C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.14	9e-15	81	Populus trichocarpa	Ptp.5085.1.S1_s_at	CV227488	hypothetical protein	-	3e-36	At1g76140	serine-type endopeptidase/ serine-type peptidase	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.59	1e-136	486	Triticum aestivum	TaAffx.91995.1.A1_at	BJ287381	-	-	1e+1	At5g03660	unknown protein	C.G.	S.X.	Please select
0.09	4e-10	63	Vitis vinifera	1619547_at	CD719431	-	-	2e-39	At1g20380	prolyl oligopeptidase, putative / prolyl endopeptidase, putative / post-proline cleaving enzyme, putative	C.G.	S.X.	Please select
0.26	3e-18	91	Zea mays	Zm.4524.1.A1_at	CD971358	-	-	1e+1	At4g00420	double-stranded RNA-binding domain (DsRBD)-containing protein	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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