Gene omics information

Query gene ID	Contig14948_at
Gene name
Organism	Hordeum vulgare

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.59	75.8	Contig14948_at	Contig14948	-	-	1e-4	At5g35730	EXS family protein / ERD1/XPR1/SYG1 family protein	S.X.	H.G.	Please select
0.43	56.4	Contig13951_at	Contig13951	-	-	7e+0	At5g18404	unknown protein	S.X.	H.G.	Please select
0.43	56.4	Contig5523_at	Contig5523	-	-	4e-8	At5g10480	PAS2 (PASTICCINO 2)	S.X.	H.G.	Please select
0.40	53.1	Contig25339_at	Contig25339	-	-	7e-2	At5g57655	xylose isomerase family protein	S.X.	H.G.	Please select
0.33	42.6	Contig7433_at	Contig7433	-	-	5e-11	At5g63650	SNRK2.5 (SNF1-RELATED PROTEIN KINASE 2.5)	S.X.	H.G.	Please select
0.29	35.5	Contig7968_at	Contig7968	-	-	3e-1	At3g53980	protease inhibitor/seed storage/lipid transfer protein (LTP) family protein	S.X.	H.G.	Please select
0.24	27.2	Contig24256_at	Contig24256	-	-	4e+0	At5g44420	PDF1.2	S.X.	H.G.	Please select
0.17	16.9	Contig20588_at	Contig20588	-	-	1e+0	At5g38130	transferase family protein	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
5.6	97.7	GSM215732	gibberellin plus Yariv-reagent treatment rep2	GSE8712	The effects of Yariv-reagent on barley aleurone GA signaling
4.3	96.4	GSM282026	Malting_day1_Legacy_rep4	GSE11200	Expression data from malting barley seeds
4.3	96.4	GSM282029	Malting_day1_Merit_rep3	GSE11200	Expression data from malting barley seeds
4.2	96.3	GSM215729	gibberellin plus Yariv-reagent treatment rep1	GSE8712	The effects of Yariv-reagent on barley aleurone GA signaling
3.9	95.8	GSM372964	genotype: Mla6 - pathogen isolates: K1 - time: 16 - rep3	GSE14930	Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene
3.7	95.5	GSM282028	Malting_day1_Merit_rep1	GSE11200	Expression data from malting barley seeds
3.5	95.1	GSM282037	Malting_day1_Morex_rep2	GSE11200	Expression data from malting barley seeds
3.5	95.1	GSM372967	genotype: Mla6 - pathogen isolates: K1 - time: 20 - rep3	GSE14930	Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene
3.3	94.6	GSM282027	Malting_day1_Legacy_rep2	GSE11200	Expression data from malting barley seeds
3.1	94.1	GSM382235	Root_Control1	GSE15295	Mercury toxicity in barley roots

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.02	2e-1	36	Contig9668_at	Contig9668	-	-	4e+0	At5g51650	unknown protein	C.G.	S.X.	Please select
0.02	9e-1	34	Contig11261_at	Contig11261	-	-	6e-13	At5g16870	aminoacyl-tRNA hydrolase	C.G.	S.X.	Please select
0.02	9e-1	34	Contig23195_at	Contig23195	-	-	1e+0	At2g41550	transcription termination factor	C.G.	S.X.	Please select
0.02	9e-1	34	Contig26285_at	Contig26285	-	-	4e+0	At5g56075	ATP binding / nucleotide binding / phenylalanine-tRNA ligase	C.G.	S.X.	Please select
0.03	9e-1	34	Contig18683_at	Contig18683	-	-	1e+0	At1g54095	unknown protein	C.G.	S.X.	Please select
0.02	9e-1	34	Contig13874_at	Contig13874	-	-	3e+0	At4g16880	disease resistance protein-related	C.G.	S.X.	Please select
0.01	9e-1	34	Contig1503_s_at	Contig1503	-	-	2e-168	At5g62700	TUB3	C.G.	S.X.	Please select
0.01	4e+0	32	Contig8021_at	Contig8021	-	-	2e-1	At1g03110	transducin family protein / WD-40 repeat family protein	C.G.	S.X.	Please select
0.02	4e+0	32	Contig15628_at	Contig15628	-	-	5e+0	At1g69935	SHW1 (SHORT HYPOCOTYL IN WHITE LIGHT1)	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.14	1e-4	48	Arabidopsis thaliana	At5g35730	833549	EXS family protein / ERD1/XPR1/SYG1 family protein	F:molecular_function unknown;P:biological_process unknown;C:integral to membrane;MFPO	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.13	8e-19	95	Glycine max	GmaAffx.61892.1.S1_at	BF716032	-	-	2e-40	At5g35730	EXS family protein / ERD1/XPR1/SYG1 family protein	C.G.	S.X.	Please select
0.41	0	644	Oryza sativa	Os12g0595000	AK065252.1	-	EXS, C-terminal domain containing protein	3e-13	At5g35730	EXS family protein / ERD1/XPR1/SYG1 family protein	C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.17	1e-8	61	Populus trichocarpa	PtpAffx.222228.1.S1_s_at	pmrna39503	predicted small molecule transporter	-	9e-22	At5g35730	EXS family protein / ERD1/XPR1/SYG1 family protein	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.45	0	670	Triticum aestivum	Ta.10706.1.S1_x_at	CK153112	-	-	5e-11	At5g35730	EXS family protein / ERD1/XPR1/SYG1 family protein	C.G.	S.X.	Please select
0.02	9e+0	30	Vitis vinifera	1621908_at	CD801832	hypothetical protein LOC100250194	-	7e-2	At2g37950	zinc finger (C3HC4-type RING finger) family protein	C.G.	S.X.	Please select
0.34	3e-56	218	Zea mays	Zm.8183.1.A1_at	BM073193	-	-	1e+0	At4g17980	anac071 (Arabidopsis NAC domain containing protein 71)	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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