Gene omics information

Query gene ID Contig14880_at
Gene name
Organism Hordeum vulgare


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.5066.9Contig14880_atContig14880--3e+0At5g52600AtMYB82 (myb domain protein 82)S.X.H.G.
0.4458.9Contig19958_atContig19958--4e+0At3g28990unknown proteinS.X.H.G.
0.4255.2HD12A16r_atHD12A16r--7e-2At4g18190ATPUP6S.X.H.G.
0.3342.6Contig20150_atContig20150--1e-5At5g59030COPT1 (copper transporter 1)S.X.H.G.
0.2935.5Contig11041_atContig11041--1e+0At3g08940LHCB4.2 (light harvesting complex PSII)S.X.H.G.
0.2224.2Contig11168_atContig11168--1e-15At5g12480CPK7 (calmodulin-domain protein kinase 7)S.X.H.G.
0.1919.6Contig2165_atContig2165--9e-35At4g13930SHM4 (serine hydroxymethyltransferase 4)S.X.H.G.
0.1818.2Contig1127_atContig1127--8e-24At1g07790HTB1S.X.H.G.
0.086.5Contig1830_atContig1830--6e-3At3g51810EM1 (LATE EMBRYOGENESIS ABUNDANT 1)S.X.H.G.
0.064.8Contig7379_atContig7379--1e-11At3g03330short-chain dehydrogenase/reductase (SDR) family proteinS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
17.599.6GSM238413Endosperm 4DAF; Seed development; Rep 2GSE9365Expression data from barley maturing and germinating grains
13.099.4GSM282026Malting_day1_Legacy_rep4GSE11200Expression data from malting barley seeds
10.699.2GSM238412Endosperm 4DAF; Seed development; Rep 1GSE9365Expression data from barley maturing and germinating grains
8.098.7GSM238428Embryo 16DAF; Seed development; Rep 1GSE9365Expression data from barley maturing and germinating grains
7.398.5GSM282029Malting_day1_Merit_rep3GSE11200Expression data from malting barley seeds
6.898.3GSM146379Maythorpe shoot Salt, biological rep 2GSE6325Array-based genotyping and expression analysis of barley cv. Maythorpe and Golden Promise
6.798.3GSM146374Golden Promise shoot Salt, biological rep 3GSE6325Array-based genotyping and expression analysis of barley cv. Maythorpe and Golden Promise
6.798.3GSM238431Embryo 25DAF; Seed development; Rep 2GSE9365Expression data from barley maturing and germinating grains
6.298.0GSM146373Golden Promise shoot Salt, biological rep 2GSE6325Array-based genotyping and expression analysis of barley cv. Maythorpe and Golden Promise
6.198.0GSM238430Embryo 25DAF; Seed development; Rep 1GSE9365Expression data from barley maturing and germinating grains
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.024e-136Contig9776_atContig9776--3e-7At2g34750RNA polymerase I specific transcription initiation factor RRN3 family proteinC.G.S.X.
0.012e+034Contig10711_atContig10711--2e-4At5g10650zinc finger (C3HC4-type RING finger) family proteinC.G.S.X.
0.022e+034Contig19508_atContig19508--1e+0At1g09250transcription factorC.G.S.X.
0.022e+034HU11O14u_atHU11O14u--1e+0At3g07510unknown proteinC.G.S.X.
0.012e+034Contig10926_atContig10926--3e-6At3g26790FUS3 (FUSCA 3)C.G.S.X.
0.012e+034Contig10250_s_atContig10250--2e-5At1g04950TAF6 (TBP-ASSOCIATED FACTOR 6)C.G.S.X.
0.012e+034Contig10250_atContig10250--2e-5At1g04950TAF6 (TBP-ASSOCIATED FACTOR 6)C.G.S.X.
0.016e+032Contig3718_s_atContig3718--2e-9At3g25690CHUP1 (CHLOROPLAST UNUSUAL POSITIONING 1)C.G.S.X.
0.016e+032Contig12296_atContig12296--2e-2At4g29130HXK1 (HEXOKINASE 1)C.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.023e+034Arabidopsis thalianaAt5g52600835337AtMYB82 (myb domain protein 82)Member of the R2R3 factor gene family.---C.G.S.X.
0.021e+036Glycine maxGma.3436.1.S1_atBQ628716--2e-1At5g08330TCP family transcription factor, putativeC.G.S.X.
0.550765Oryza sativaOs01g0600300AK102895.1-Conserved hypothetical protein1e+0At2g27390proline-rich family proteinC.G.S.X.
0.021e+036Populus trichocarpaPtpAffx.50262.1.S1_s_atCV252614hypothetical protein-4e+0At5g65300unknown proteinC.G.S.X.
0.503e-130466Triticum aestivumTa.20252.1.A1_atCA676876--1e+0At5g63870PP7 (SERINE/THREONINE PHOSPHATASE 7)C.G.S.X.
0.022e-136Vitis vinifera1610792_atCD714708--1e-6At3g08510ATPLC2 (PHOSPHOLIPASE C 2)C.G.S.X.
0.447e-67254Zea maysZm.2702.2.S1_atCA405056hypothetical protein LOC100276342-3e+0At5g24660LSU2 (RESPONSE TO LOW SULFUR 2)C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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