Gene omics information

Query gene ID	Contig14753_at
Gene name
Organism	Hordeum vulgare

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.77	90.8	Contig14753_at	Contig14753	-	-	4e-7	At5g38060	unknown protein	S.X.	H.G.	Please select
0.67	84.7	Contig125_at	Contig125	-	-	2e+0	At4g25720	QC (GLUTAMINYL CYCLASE)	S.X.	H.G.	Please select
0.50	66.9	Contig15156_at	Contig15156	-	-	2e+0	At1g48210	serine/threonine protein kinase, putative	S.X.	H.G.	Please select
0.47	62.2	Contig3633_s_at	Contig3633	-	-	7e-1	At3g13480	unknown protein	S.X.	H.G.	Please select
0.44	58.9	Contig15157_at	Contig15157	-	-	1e+0	At3g20370	meprin and TRAF homology domain-containing protein / MATH domain-containing protein	S.X.	H.G.	Please select
0.38	49.5	Contig16867_at	Contig16867	-	-	7e-9	At3g02690	integral membrane family protein	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
8.3	98.8	GSM261075	Albina e-16 Control rep2	GSE10332	Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1
7.8	98.6	GSM261074	Albina e-16 Control rep1	GSE10332	Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1
6.2	98.0	GSM261076	Albina e-16 Control rep3	GSE10332	Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1
5.5	97.6	GSM261040	Dicktoo-deacclimation-rep2	GSE10329	Low temperature stress in cv. Dicktoo
4.9	97.1	GSM261022	ABA-Control-rep2	GSE10328	ABA experiment
4.9	97.1	GSM160819	38% SWC rep1	GSE6990	Barley drought stress
4.6	96.8	GSM160822	38% SWC rep3	GSE6990	Barley drought stress
4.5	96.7	GSM160464	drought control rep1	GSE6990	Barley drought stress
4.4	96.6	GSM160826	19% SWC rep3	GSE6990	Barley drought stress
4.1	96.2	GSM261024	ABA-Early-rep1	GSE10328	ABA experiment

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.03	7e-1	34	Contig17801_at	Contig17801	-	-	1e+0	At4g36620	zinc finger (GATA type) family protein	C.G.	S.X.	Please select
0.03	7e-1	34	Contig17800_s_at	Contig17800	-	-	8e-2	At5g25750	unknown protein	C.G.	S.X.	Please select
0.03	7e-1	34	HA28H23r_s_at	HA28H23r	-	-	4e+0	At5g64250	2-nitropropane dioxygenase family / NPD family	C.G.	S.X.	Please select
0.03	7e-1	34	HA28H23r_at	HA28H23r	-	-	4e+0	At5g64250	2-nitropropane dioxygenase family / NPD family	C.G.	S.X.	Please select
0.03	7e-1	34	Contig4816_x_at	Contig4816	-	-	5e+0	At1g70700	TIFY7	C.G.	S.X.	Please select
0.01	7e-1	34	Contig3135_at	Contig3135	-	-	3e-1	At3g03450	RGL2 (RGA-LIKE 2)	C.G.	S.X.	Please select
0.03	7e-1	34	Contig14302_at	Contig14302	-	-	5e+0	At5g39530	unknown protein	C.G.	S.X.	Please select
0.03	7e-1	34	Contig4813_at	Contig4813	-	-	1e+0	At1g70700	TIFY7	C.G.	S.X.	Please select
0.03	7e-1	34	Contig24294_at	Contig24294	-	-	5e+0	At4g34590	GBF6 (G-BOX BINDING FACTOR 6)	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.09	4e-7	56	Arabidopsis thaliana	At5g38060	833786	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:chloroplast;P	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.03	5e-1	36	Glycine max	HgAffx.22712.1.S1_at	CB377863	-	-	1e+0	At5g01450	protein binding / zinc ion binding	C.G.	S.X.	Please select
0.25	1e-39	165	Oryza sativa	Os08g0364500	CA761002	-	Conserved hypothetical protein	1e-9	At5g38060	unknown protein	C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.13	8e-3	42	Populus trichocarpa	PtpAffx.18592.2.A1_at	CV242770	hypothetical protein	-	9e-17	At5g38060	unknown protein	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.66	2e-178	624	Triticum aestivum	TaAffx.111902.1.S1_at	CA630792	-	-	2e-2	At5g38060	unknown protein	C.G.	S.X.	Please select
0.04	2e+0	32	Vitis vinifera	1613973_at	AY037918.1	-	-	9e+0	At2g03180	unknown protein	C.G.	S.X.	Please select
0.03	6e-1	34	Zea mays	Zm.5539.1.A1_at	BG842565	hypothetical protein LOC100276652	-	5e+0	At5g03090	unknown protein	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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