CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Contig14721_at

Gene name

Organism Hordeum vulgare

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.91 98.1 Contig14721_at Contig14721 - - 5e+0 At4g15670 glutaredoxin family protein S.X. H.G.
0.60 77.3 Contig6949_at Contig6949 - - 2e+0 At2g25230 MYB100 (myb domain protein 100) S.X. H.G.
0.53 69.7 Contig9101_s_at Contig9101 - - 7e+0 At5g23930 mitochondrial transcription termination factor-related / mTERF-related S.X. H.G.
0.40 53.1 Contig10808_at Contig10808 - - 6e+0 At5g18362 unknown protein S.X. H.G.
0.40 53.1 Contig15721_at Contig15721 - - 1e+0 At5g59360 unknown protein S.X. H.G.
0.31 38.6 Contig17628_at Contig17628 - - 8e-1 At1g05960 binding S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
13.4 99.4 GSM261055 Bonus Hardened rep3 GSE10332 Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1
10.1 99.1 GSM261073 Albina f-17 Hardened rep3 GSE10332 Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1
7.5 98.6 GSM261053 Bonus Hardened rep1 GSE10332 Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1
7.0 98.4 GSM261067 Xantha s-46 Hardened rep3 GSE10332 Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1
6.2 98.0 GSM261054 Bonus Hardened rep2 GSE10332 Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1
6.0 97.9 GSM261061 Xantha b-12 Hardened rep3 GSE10332 Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1
4.8 97.0 GSM398281 Moroc9-75_5d_rep1 GSE15970 Differentially Expressed Genes between Drought-tolerant and Drought-sensitive Barley Genotypes
4.7 96.9 GSM261072 Albina f-17 Hardened rep2 GSE10332 Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1
4.5 96.7 GSM261038 Dicktoo-subzero-rep3 GSE10329 Low temperature stress in cv. Dicktoo
4.5 96.7 GSM261042 before 3 days in mannitol medium rep1 GSE10330 Transcriptome analysis of barley anthers: effect of mannitol treatment on microspore embryogenesis
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.04 4e-8 57 Contig17498_at Contig17498 - - 1e-7 At3g18480 AtCASP (Arabidopsis thaliana CCAAT-displacement protein alternatively spliced product) C.G. S.X.
0.05 2e-7 56 HU08P10u_at HU08P10u - - 1e+0 At5g65580 unknown protein C.G. S.X.
0.03 7e-7 54 Contig18494_at Contig18494 - - 1e-2 At4g35290 GLUR2 (GLUTAMATE RECEPTOR 2) C.G. S.X.
0.04 1e-5 50 Contig9624_at Contig9624 - - 2e+0 At5g19140 AILP1 C.G. S.X.
0.04 4e-5 48 Contig11662_at Contig11662 - - 7e+0 At5g07410 pectinesterase family protein C.G. S.X.
0.04 4e-5 48 Contig11663_at Contig11663 - - 3e-2 At3g08580 AAC1 (ADP/ATP CARRIER 1) C.G. S.X.
0.04 4e-5 48 Contig11662_s_at Contig11662 - - 7e+0 At5g07410 pectinesterase family protein C.G. S.X.
0.05 2e-4 46 EBro03_SQ003_E09_at EBro03_SQ003_E09 - - 3e+0 At2g32645 unknown protein C.G. S.X.
0.02 2e-4 46 Contig8749_at Contig8749 - - 3e+0 At4g29730 NFC5 (Nucleosome/chromatin assembly factor group C 5) C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.03 5e+0 32 Arabidopsis thaliana At4g15670 827244 glutaredoxin family protein F:electron carrier activity, arsenate reductase (glutaredoxin) activity, protein disulfide oxidoreductase activity;P:cell redox homeostasis;C:cellular_component unknown;PMFOB - - - C.G. S.X.
0.03 1e-1 38 Glycine max HgAffx.7585.1.S1_at CB824627 - - 8e-2 At3g50695 unknown protein C.G. S.X.
0.08 3e-18 93 Oryza sativa Os04g0585200 AK099753.1 - Glutamate receptor 3.3 precursor (Ligand-gated ionchannel 3.3) 4e-7 At4g35290 GLUR2 (GLUTAMATE RECEPTOR 2) C.G. S.X.
0.03 7e+0 32 Populus trichocarpa PtpAffx.4534.1.S1_at CV255481 - - 9e-1 At3g03828 unknown protein C.G. S.X.
0.58 8e-107 387 Triticum aestivum Ta.5468.1.A1_at CD900672 - - 6e+0 At1g08380 PSAO (photosystem I subunit O) C.G. S.X.
0.03 4e-1 34 Vitis vinifera 1611502_at CB913863 - - 7e-14 At3g14180 transcription factor C.G. S.X.
0.03 9e-3 40 Zea mays Zm.1265.2.A1_a_at CF628852 Hypothetical protein LOC100192992 - 1e+0 At5g53180 PTB2 (POLYPYRIMIDINE TRACT-BINDING PROTEIN 2) C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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