CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Contig14472_at

Gene name

Organism Hordeum vulgare

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.74 89.1 Contig14472_at Contig14472 - - 4e-8 At1g28440 HSL1 (HAESA-Like 1) S.X. H.G.
0.53 69.7 Contig5117_at Contig5117 - - 8e-2 At5g60500 undecaprenyl pyrophosphate synthetase family protein / UPP synthetase family protein S.X. H.G.
0.53 69.7 Contig11464_at Contig11464 - - 6e-20 At1g55740 AtSIP1 (Arabidopsis thaliana seed imbibition 1) S.X. H.G.
0.53 69.7 Contig725_s_at Contig725 - - 1e-15 At1g21750 ATPDIL1-1 (PDI-LIKE 1-1) S.X. H.G.
0.50 66.9 Contig12398_at Contig12398 - - 2e-1 At2g31240 tetratricopeptide repeat (TPR)-containing protein S.X. H.G.
0.44 58.9 Contig125_at Contig125 - - 2e+0 At4g25720 QC (GLUTAMINYL CYCLASE) S.X. H.G.
0.40 53.1 Contig15156_at Contig15156 - - 2e+0 At1g48210 serine/threonine protein kinase, putative S.X. H.G.
0.39 50.5 Contig13413_at Contig13413 - - 1e+0 At3g46210 3' exoribonuclease family domain 1-containing protein S.X. H.G.
0.36 47.1 Contig5297_at Contig5297 - - 4e-16 At1g64550 ATGCN3 S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
9.0 98.9 GSM372971 genotype: Mla6 - pathogen isolates: K1 - time: 32 - rep1 GSE14930 Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene
6.7 98.3 GSM372965 genotype: Mla6 - pathogen isolates: K1 - time: 20 - rep1 GSE14930 Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene
6.4 98.1 GSM261027 ABA-Late-rep1 GSE10328 ABA experiment
6.0 97.9 GSM68890 3 h control replicate 2 GSE3097 Barley1 salinity stress study
4.7 96.9 GSM372942 genotype: Mla6 - pathogen isolates: 5874 - time: 8 - rep2 GSE14930 Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene
4.6 96.8 GSM160819 38% SWC rep1 GSE6990 Barley drought stress
4.4 96.6 GSM68898 8 h salt stressed replicate 1 GSE3097 Barley1 salinity stress study
4.2 96.3 GSM68896 8 h control replicate 2 GSE3097 Barley1 salinity stress study
4.2 96.3 GSM372970 genotype: Mla6 - pathogen isolates: K1 - time: 24 - rep3 GSE14930 Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene
4.1 96.2 GSM372941 genotype: Mla6 - pathogen isolates: 5874 - time: 8 - rep1 GSE14930 Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.07 5e-12 71 Contig10767_at Contig10767 - - 3e-15 At3g49670 BAM2 (BARELY ANY MERISTEM 2) C.G. S.X.
0.03 3e-7 56 Contig9237_at Contig9237 - - 6e-8 At1g07570 APK1A C.G. S.X.
0.07 8e-5 48 Contig10148_at Contig10148 - - 2e-22 At5g65700 BAM1 (BARELY ANY MERISTEM 1) C.G. S.X.
0.04 1e-3 44 Contig20521_at Contig20521 - - 4e-4 At1g48210 serine/threonine protein kinase, putative C.G. S.X.
0.03 5e-3 42 Contig13446_at Contig13446 - - 1e-2 At5g02070 protein kinase-related C.G. S.X.
0.01 2e-2 40 Contig10292_at Contig10292 - - 9e-23 At1g07650 leucine-rich repeat transmembrane protein kinase, putative C.G. S.X.
0.04 8e-2 38 Contig20719_at Contig20719 - - 3e-2 At3g17840 RLK902 C.G. S.X.
0.02 8e-2 38 Contig16878_at Contig16878 - - 6e-7 At2g37050 kinase C.G. S.X.
0.03 8e-2 38 Contig11925_at Contig11925 - - 2e-40 At2g30740 serine/threonine protein kinase, putative C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.03 4e-8 59 Arabidopsis thaliana At1g28440 839742 HSL1 (HAESA-Like 1) F:protein serine/threonine kinase activity, kinase activity, ATP binding;P:transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation;C:unknown;MPOBFVA - - - C.G. S.X.
0.02 9e-1 36 Glycine max Gma.17656.1.S1_at BE807213 - - 1e+0 At3g58780 SHP1 (SHATTERPROOF 1) C.G. S.X.
0.19 2e-116 420 Oryza sativa Os01g0239700 AK067723.1 - Leucine-rich receptor-like protein kinase 3e-8 At1g28440 HSL1 (HAESA-Like 1) C.G. S.X.
0.04 6e-5 50 Populus trichocarpa PtpAffx.215531.1.S1_at pmrna29784 hypothetical protein - 1e-35 At1g28440 HSL1 (HAESA-Like 1) C.G. S.X.
0.29 4e-61 236 Triticum aestivum TaAffx.29572.1.S1_at CA639701 - - 4e+0 At5g06043 unknown protein C.G. S.X.
0.11 5e-8 57 Vitis vinifera 1607952_at CF372631 hypothetical protein LOC100250523 - 3e-8 At1g28440 HSL1 (HAESA-Like 1) C.G. S.X.
0.06 2e-14 79 Zea mays Zm.1140.1.S1_at BM073428 hypothetical protein LOC100279272 - 4e-14 At3g49670 BAM2 (BARELY ANY MERISTEM 2) C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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