CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Contig14457_at

Gene name

Organism Hordeum vulgare

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.58 74.9 Contig14457_at Contig14457 - - 6e-3 At2g44525 unknown protein S.X. H.G.
0.47 62.2 Contig7818_s_at Contig7818 - - 2e-2 At5g02502 unknown protein S.X. H.G.
0.46 61.0 Contig3853_s_at Contig3853 - - 6e+0 At5g11860 NLI interacting factor (NIF) family protein S.X. H.G.
0.40 53.1 Contig3530_at Contig3530 - - 4e-37 At3g01090 AKIN10 (Arabidopsis SNF1 kinase homolog 10) S.X. H.G.
0.36 47.1 Contig3269_at Contig3269 - - 2e-19 At1g13060 PBE1 S.X. H.G.
0.34 43.6 Contig4907_s_at Contig4907 - - 5e-4 At1g66340 ETR1 (ETHYLENE RESPONSE 1) S.X. H.G.
0.32 40.3 Contig10280_at Contig10280 - - 7e-22 At5g20510 AL5 (ALFIN-LIKE 5) S.X. H.G.
0.30 37.0 Contig3007_s_at Contig3007 - - 3e-7 At3g10860 ubiquinol-cytochrome C reductase complex ubiquinone-binding protein, putative / ubiquinol-cytochrome C reductase complex 8.2 kDa protein, putative S.X. H.G.
0.30 37.0 Contig5871_at Contig5871 - - 2e+0 At2g38860 YLS5 S.X. H.G.
0.29 35.5 Contig9709_s_at Contig9709 - - 2e-7 At3g60800 zinc finger (DHHC type) family protein S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
8.7 98.9 GSM261047 after 3 days in mannitol medium rep3 GSE10330 Transcriptome analysis of barley anthers: effect of mannitol treatment on microspore embryogenesis
8.0 98.7 GSM261045 after 3 days in mannitol medium rep1 GSE10330 Transcriptome analysis of barley anthers: effect of mannitol treatment on microspore embryogenesis
6.3 98.1 GSM261074 Albina e-16 Control rep1 GSE10332 Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1
5.6 97.7 GSM261046 after 3 days in mannitol medium rep2 GSE10330 Transcriptome analysis of barley anthers: effect of mannitol treatment on microspore embryogenesis
5.0 97.2 GSM282036 Malting_steeped_Morex_rep2 GSE11200 Expression data from malting barley seeds
4.6 96.8 GSM282041 Control_dryseed_Morex_rep2 GSE11200 Expression data from malting barley seeds
4.4 96.6 GSM382235 Root_Control1 GSE15295 Mercury toxicity in barley roots
4.1 96.2 GSM282034 Malting_steeped_Morex_rep1 GSE11200 Expression data from malting barley seeds
3.6 95.3 GSM282040 Malting_kilned_Morex_rep2 GSE11200 Expression data from malting barley seeds
3.6 95.3 GSM282030 Malting_day4_Harrington_rep2 GSE11200 Expression data from malting barley seeds
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.98 0 1475 Contig14457_s_at Contig14457 - - 6e-3 At2g44525 unknown protein C.G. S.X.
0.02 5e-2 38 Contig14050_at Contig14050 - - 4e-4 At2g27130 protease inhibitor/seed storage/lipid transfer protein (LTP) family protein C.G. S.X.
0.02 2e-1 36 Contig10638_s_at Contig10638 - - 5e-1 At2g20921 unknown protein C.G. S.X.
0.01 2e-1 36 Contig7441_at Contig7441 - - 7e-39 At3g57150 NAP57 (Arabidopsis thaliana homologue of NAP57) C.G. S.X.
0.02 2e-1 36 Contig20125_at Contig20125 - - 3e+0 At3g05540 - C.G. S.X.
0.03 2e-1 36 HO10M16S_at HO10M16S - - 7e-5 At5g28630 glycine-rich protein C.G. S.X.
0.02 2e-1 36 Contig16099_at Contig16099 - - 8e+0 At5g28800 unknown protein C.G. S.X.
0.02 2e-1 36 Contig6782_at Contig6782 - - 6e-1 At5g41660 unknown protein C.G. S.X.
0.01 7e-1 34 Contig4412_at Contig4412 - - 6e-15 At1g79940 ATERDJ2A C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.07 6e-3 42 Arabidopsis thaliana At2g44525 819060 unknown protein F:molecular_function unknown;P:biological_process unknown;C:unknown;BMOFP - - - C.G. S.X.
0.05 2e-6 54 Glycine max Gma.8578.1.S1_at BQ079840 - - 4e-26 At3g60150 unknown protein C.G. S.X.
0.50 4e-129 462 Oryza sativa Os10g0571100 CA999969 - Conserved hypothetical protein 3e-11 At3g60150 unknown protein C.G. S.X.
0.02 2e+0 34 Populus trichocarpa PtpAffx.217331.1.S1_at pmrna32547 hypothetical protein - 1e+0 At1g05290 transcription factor C.G. S.X.
0.75 0 906 Triticum aestivum Ta.3566.1.S1_at CA635816 - - 2e-3 At2g44525 unknown protein C.G. S.X.
0.07 2e-9 61 Vitis vinifera 1621007_s_at CF512257 hypothetical protein LOC100249656 - 3e-17 At3g60150 unknown protein C.G. S.X.
0.41 8e-93 339 Zea mays Zm.353.2.S1_at CO520749 - - 9e-3 At2g44525 unknown protein C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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