Gene omics information

Query gene ID	Contig14363_at
Gene name
Organism	Hordeum vulgare

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.91	98.1	Contig14363_at	Contig14363	-	-	4e-8	At5g36290	unknown protein	S.X.	H.G.	Please select
0.02	1.8	Contig12168_at	Contig12168	-	-	4e-1	At4g16980	arabinogalactan-protein family	S.X.	H.G.	Please select
0.02	1.8	Contig15356_at	Contig15356	-	-	5e-1	At1g24440	protein binding / zinc ion binding	S.X.	H.G.	Please select
0.01	1.1	HM14B07r_at	HM14B07r	-	-	5e+0	At4g35950	ARAC6 (ARABIDOPSIS RAC-LIKE 6)	S.X.	H.G.	Please select
0.00	0.2	Contig4807_at	Contig4807	-	-	8e-11	At5g04750	F1F0-ATPase inhibitor protein, putative	S.X.	H.G.	Please select
0.00	0.2	EBem10_SQ001_L08_at	EBem10_SQ001_L08	-	-	1e-1	At2g16860	GCIP-interacting family protein	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
6.5	98.2	GSM282026	Malting_day1_Legacy_rep4	GSE11200	Expression data from malting barley seeds
6.2	98.0	GSM238410	Pericarp 8DAF; seed development; Rep 1	GSE9365	Expression data from barley maturing and germinating grains
5.4	97.5	GSM282037	Malting_day1_Morex_rep2	GSE11200	Expression data from malting barley seeds
5.2	97.4	GSM282032	Malting_day1_Morex_rep1	GSE11200	Expression data from malting barley seeds
4.8	97.0	GSM238436	Embryo 48 h; Seed germination; Rep 1	GSE9365	Expression data from barley maturing and germinating grains
4.5	96.7	GSM238438	Embryo 72 h; Seed germination; Rep 1	GSE9365	Expression data from barley maturing and germinating grains
4.0	96.0	GSM238411	Pericarp 8DAF; seed development; Rep 2	GSE9365	Expression data from barley maturing and germinating grains
3.7	95.5	GSM238437	Embryo 48 h; Seed germination; Rep 2	GSE9365	Expression data from barley maturing and germinating grains
3.6	95.3	GSM282027	Malting_day1_Legacy_rep2	GSE11200	Expression data from malting barley seeds
3.5	95.1	GSM282039	Malting_day4_Morex_rep2	GSE11200	Expression data from malting barley seeds

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.02	7e-2	38	Contig15152_at	Contig15152	-	-	3e-1	At3g11820	SYP121 (SYNTAXIN OF PLANTS 121)	C.G.	S.X.	Please select
0.02	7e-2	38	Contig3430_at	Contig3430	-	-	3e-2	At4g14690	ELIP2 (EARLY LIGHT-INDUCIBLE PROTEIN 2)	C.G.	S.X.	Please select
0.02	7e-2	38	Contig3432_s_at	Contig3432	-	-	3e-2	At4g14690	ELIP2 (EARLY LIGHT-INDUCIBLE PROTEIN 2)	C.G.	S.X.	Please select
0.03	3e-1	36	Contig9032_s_at	Contig9032	-	-	1e+1	At3g24513	-	C.G.	S.X.	Please select
0.01	3e-1	36	Contig12105_at	Contig12105	-	-	2e-2	At3g52640	nicastrin-related	C.G.	S.X.	Please select
0.02	3e-1	36	Contig9172_at	Contig9172	-	-	4e-4	At3g62020	GLP10 (GERMIN-LIKE PROTEIN 10)	C.G.	S.X.	Please select
0.02	3e-1	36	HVSMEl0010C23r2_at	HVSMEl0010C23r2	-	-	1e+0	At4g03520	ATHM2	C.G.	S.X.	Please select
0.01	3e-1	36	Contig9903_at	Contig9903	-	-	1e-2	At3g20500	PAP18 (PURPLE ACID PHOSPHATASE 18)	C.G.	S.X.	Please select
0.02	3e-1	36	Contig9230_s_at	Contig9230	-	-	2e+0	At1g78410	VQ motif-containing protein	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.12	4e-8	59	Arabidopsis thaliana	At5g36290	833627	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:endomembrane system, membrane;BMOPFA	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.16	5e-8	59	Glycine max	Gma.10004.1.S1_at	BF070937	-	-	6e-25	At5g36290	unknown protein	C.G.	S.X.	Please select
0.55	4e-176	619	Oryza sativa	Os08g0528500	AK111028.1	-	Protein of unknown function UPF0016 family protein	3e-2	At5g36290	unknown protein	C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.31	3e-12	73	Populus trichocarpa	PtpAffx.6482.1.S1_at	CV260043	predicted membrane protein	-	4e-82	At5g36290	unknown protein	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.59	0	787	Triticum aestivum	Ta.9324.2.S1_a_at	CA659465	-	-	4e-4	At5g36290	unknown protein	C.G.	S.X.	Please select
0.14	1e-26	119	Vitis vinifera	1611691_s_at	CB980403	hypothetical protein LOC100265089	-	6e-59	At5g36290	unknown protein	C.G.	S.X.	Please select
0.27	2e-26	119	Zea mays	Zm.5147.1.A1_at	CK787170	-	-	2e-25	At5g36290	unknown protein	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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