CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Contig14342_at

Gene name

Organism Hordeum vulgare

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.59 75.8 Contig14342_at Contig14342 - - 5e+0 At1g07485 unknown protein S.X. H.G.
0.80 92.5 Contig19400_at Contig19400 - - 2e+0 At1g78480 prenyltransferase/squalene oxidase repeat-containing protein S.X. H.G.
0.25 28.9 Contig14804_s_at Contig14804 - - 2e-11 At1g31800 CYP97A3 (CYTOCHROME P450-TYPE MONOOXYGENASE 97A3) S.X. H.G.
0.12 10.4 Contig13202_at Contig13202 - - 2e+0 At3g02150 PTF1 (PLASTID TRANSCRIPTION FACTOR 1) S.X. H.G.
0.09 7.4 Contig20937_at Contig20937 - - 1e+0 At5g04510 PDK1 (3'-PHOSPHOINOSITIDE-DEPENDENT PROTEIN KINASE 1) S.X. H.G.
0.08 6.5 Contig4797_at Contig4797 - - 2e+0 At3g02480 ABA-responsive protein-related S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
41.9 99.9 GSM215731 gibberellin treatment rep2 GSE8712 The effects of Yariv-reagent on barley aleurone GA signaling
15.1 99.5 GSM215728 gibberellin treatment rep1 GSE8712 The effects of Yariv-reagent on barley aleurone GA signaling
14.6 99.5 GSM440974 Stressed awn_Rep3 GSE17669 Gene expression in the barley spike during drought stress
11.6 99.3 GSM440973 Stressed awn_Rep2 GSE17669 Gene expression in the barley spike during drought stress
9.2 99.0 GSM440972 Stressed awn_Rep1 GSE17669 Gene expression in the barley spike during drought stress
8.4 98.8 GSM71145 OWB-D unstress replicate 1 GSE3170 Barley single feature polymorphisms and drought stress gene expression
8.3 98.8 GSM71141 OWB-D stress replicate 3 GSE3170 Barley single feature polymorphisms and drought stress gene expression
7.6 98.6 GSM440962 Stressed lemma_Rep3 GSE17669 Gene expression in the barley spike during drought stress
7.4 98.5 GSM71156 Morex stress and unstress replicate 3 GSE3170 Barley single feature polymorphisms and drought stress gene expression
7.0 98.4 GSM71139 OWB-D stress replicate 1 GSE3170 Barley single feature polymorphisms and drought stress gene expression
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.08 7e-7 54 Contig9000_at Contig9000 - - 9e+0 At2g21320 zinc finger (B-box type) family protein C.G. S.X.
0.08 2e-4 46 HV_CEb0010H17r2_at HV_CEb0010H17r2 - - 4e+0 At1g07130 STN1 C.G. S.X.
0.07 2e-4 46 Contig11996_s_at Contig11996 - - 1e+0 At1g10100 unknown protein C.G. S.X.
0.07 2e-4 46 Contig11996_at Contig11996 - - 1e+0 At1g10100 unknown protein C.G. S.X.
0.06 2e-4 46 Contig11995_at Contig11995 - - 4e-1 At2g29050 ATRBL1 (Arabidopsis thaliana Rhomboid-like 1) C.G. S.X.
0.11 3e-3 42 Contig23913_at Contig23913 - - 4e-1 At1g06980 unknown protein C.G. S.X.
0.04 1e-2 40 Contig13984_at Contig13984 - - 6e-7 At5g07030 aspartic-type endopeptidase C.G. S.X.
0.03 4e-2 38 rbaal9e07_at rbaal9e07 - - 5e+0 At5g47060 senescence-associated protein-related C.G. S.X.
0.04 4e-2 38 Contig10558_at Contig10558 - - 8e-4 At5g07030 aspartic-type endopeptidase C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.04 5e+0 32 Arabidopsis thaliana At1g07485 5007669 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P - - - C.G. S.X.
0.06 1e-1 38 Glycine max GmaAffx.24992.1.S1_at BU083490 - - 1e+0 At5g10770 chloroplast nucleoid DNA-binding protein, putative C.G. S.X.
0.23 4e-27 123 Oryza sativa Os06g0610800 AK062719.1 - Peptidase A1, pepsin family protein 1e+0 At3g24010 ING1 (INHIBITOR OF GROWTH 1) C.G. S.X.
0.04 7e+0 32 Populus trichocarpa PtpAffx.218304.1.S1_x_at pmrna33871 hypothetical protein - 5e+0 At5g45040 cytochrome c6 (ATC6) C.G. S.X.
0.53 0 730 Triticum aestivum Ta.25381.1.S1_s_at CD454332 - - 1e+1 At2g33130 RALFL18 (ralf-like 18) C.G. S.X.
0.03 6e+0 30 Vitis vinifera 1617398_s_at CB971757 hypothetical protein LOC100252381 - 2e-1 At2g41040 methyltransferase-related C.G. S.X.
0.06 6e-7 54 Zea mays Zm.8452.1.A1_at BM341525 - - 8e+0 At5g20820 auxin-responsive protein-related C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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