Gene omics information

Query gene ID	Contig14296_at
Gene name
Organism	Hordeum vulgare

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.44	58.9	Contig14296_at	Contig14296	-	-	4e+0	At1g07140	SIRANBP	S.X.	H.G.	Please select
0.63	80.3	Contig14921_s_at	Contig14921	-	-	3e+0	At4g38370	phosphoglycerate/bisphosphoglycerate mutase family protein	S.X.	H.G.	Please select
0.61	78.7	Contig20510_at	Contig20510	-	-	4e+0	At4g00355	unknown protein	S.X.	H.G.	Please select
0.56	74.3	Contig9144_at	Contig9144	-	-	1e-15	At3g20860	ATNEK5 (NIMA-RELATED KINASE5)	S.X.	H.G.	Please select
0.52	68.3	Contig12950_at	Contig12950	-	-	3e-6	At1g76510	ARID/BRIGHT DNA-binding domain-containing protein	S.X.	H.G.	Please select
0.50	66.9	Contig10076_at	Contig10076	-	-	5e-15	At4g13020	MHK	S.X.	H.G.	Please select
0.50	66.9	Contig17293_at	Contig17293	-	-	1e-1	At5g57790	unknown protein	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
14.5	99.5	GSM372945	genotype: Mla6 - pathogen isolates: 5874 - time: 16 - rep2	GSE14930	Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene
13.2	99.4	GSM146362	Golden Promise Root Salt, biological rep 3	GSE6325	Array-based genotyping and expression analysis of barley cv. Maythorpe and Golden Promise
11.5	99.3	GSM372967	genotype: Mla6 - pathogen isolates: K1 - time: 20 - rep3	GSE14930	Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene
11.5	99.3	GSM146368	Maythorpe Root Salt, biological rep 3	GSE6325	Array-based genotyping and expression analysis of barley cv. Maythorpe and Golden Promise
10.9	99.2	GSM372953	genotype: Mla6 - pathogen isolates: 5874 - time: 32 - rep1	GSE14930	Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene
10.5	99.2	GSM372950	genotype: Mla6 - pathogen isolates: 5874 - time: 24 - rep1	GSE14930	Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene
10.4	99.2	GSM372954	genotype: Mla6 - pathogen isolates: 5874 - time: 32 - rep2	GSE14930	Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene
8.9	98.9	GSM372947	genotype: Mla6 - pathogen isolates: 5874 - time: 20 - rep1	GSE14930	Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene
7.3	98.5	GSM146367	Maythorpe Root Salt, biological rep 2	GSE6325	Array-based genotyping and expression analysis of barley cv. Maythorpe and Golden Promise
6.8	98.3	GSM146366	Maythorpe Root Salt, biological rep 1	GSE6325	Array-based genotyping and expression analysis of barley cv. Maythorpe and Golden Promise

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.02	2e+0	32	Contig14519_at	Contig14519	-	-	4e-8	At2g30880	pleckstrin homology (PH) domain-containing protein	C.G.	S.X.	Please select
0.02	2e+0	32	Contig17119_at	Contig17119	-	-	2e+0	At2g21960	unknown protein	C.G.	S.X.	Please select
0.03	2e+0	32	HVSMEn0006O04f2_at	HVSMEn0006O04f2	-	-	4e+0	At5g17660	tRNA (guanine-N7-)-methyltransferase	C.G.	S.X.	Please select
0.03	2e+0	32	EBem10_SQ005_G09_at	EBem10_SQ005_G09	-	-	3e+0	At5g05690	CPD (CONSTITUTIVE PHOTOMORPHOGENIC DWARF)	C.G.	S.X.	Please select
0.03	2e+0	32	Contig25427_at	Contig25427	-	-	1e+0	At1g54070	dormancy/auxin associated protein-related	C.G.	S.X.	Please select
0.01	2e+0	32	Contig7503_at	Contig7503	-	-	7e-14	At4g13400	unknown protein	C.G.	S.X.	Please select
0.01	2e+0	32	Contig6670_at	Contig6670	-	-	2e-1	At5g11810	unknown protein	C.G.	S.X.	Please select
0.03	8e+0	30	HD04H12r_at	HD04H12r	-	-	8e-1	At3g22850	unknown protein	C.G.	S.X.	Please select
0.01	8e+0	30	Contig6351_at	Contig6351	-	-	3e-4	At1g42560	MLO9 (MILDEW RESISTANCE LOCUS O 9)	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.03	4e+0	32	Arabidopsis thaliana	At1g07140	837225	SIRANBP	Encodes a putative Ran-binding protein (siRanBP).	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.05	9e-2	38	Glycine max	GmaAffx.87315.1.S1_s_at	BM525379	-	-	3e+0	At2g28090	heavy-metal-associated domain-containing protein	C.G.	S.X.	Please select
0.04	2e+0	34	Oryza sativa	Os04g0591800	9632.m04882	-	-	2e+0	At2g30766	unknown protein	C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.04	6e+0	32	Populus trichocarpa	PtpAffx.209965.1.S1_at	pmrna19652	hypothetical protein	-	3e-14	At1g53140	dynamin family protein	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.55	4e-43	174	Triticum aestivum	TaAffx.12232.1.A1_at	BJ284245	-	-	2e+1	At5g05598	-	C.G.	S.X.	Please select
0.04	3e-1	34	Vitis vinifera	1609686_at	BQ799994	-	-	4e-1	At5g56230	PRA1.G2 (PRENYLATED RAB ACCEPTOR 1.G2)	C.G.	S.X.	Please select
0.03	7e+0	30	Zea mays	Zm.4506.1.A1_at	AI734492	transport inhibitor response 1 protein	-	4e+0	At2g29450	ATGSTU5 (ARABIDOPSIS THALIANA GLUTATHIONE S-TRANSFERASE TAU 5)	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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