CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Contig14217_at

Gene name

Organism Hordeum vulgare

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.50 66.9 Contig14217_at Contig14217 - - 1e+0 At1g77480 nucellin protein, putative S.X. H.G.
0.44 58.9 Contig16955_at Contig16955 - - 1e-1 At5g06160 ATO (ATROPOS) S.X. H.G.
0.36 47.1 Contig1557_at Contig1557 - - 3e-23 At3g60245 60S ribosomal protein L37a (RPL37aC) S.X. H.G.
0.27 32.1 Contig4368_at Contig4368 - - 3e-1 At3g04300 - S.X. H.G.
0.04 3.4 X70876_at X70876 - - 7e-19 At4g38620 MYB4 S.X. H.G.
0.03 2.6 Contig6072_at Contig6072 - - 5e-1 At5g03380 heavy-metal-associated domain-containing protein S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
43.7 99.9 GSM261045 after 3 days in mannitol medium rep1 GSE10330 Transcriptome analysis of barley anthers: effect of mannitol treatment on microspore embryogenesis
30.6 99.9 GSM261046 after 3 days in mannitol medium rep2 GSE10330 Transcriptome analysis of barley anthers: effect of mannitol treatment on microspore embryogenesis
30.0 99.9 GSM261047 after 3 days in mannitol medium rep3 GSE10330 Transcriptome analysis of barley anthers: effect of mannitol treatment on microspore embryogenesis
8.7 98.9 GSM261042 before 3 days in mannitol medium rep1 GSE10330 Transcriptome analysis of barley anthers: effect of mannitol treatment on microspore embryogenesis
8.2 98.7 GSM261044 before 3 days in mannitol medium rep3 GSE10330 Transcriptome analysis of barley anthers: effect of mannitol treatment on microspore embryogenesis
7.8 98.6 GSM238410 Pericarp 8DAF; seed development; Rep 1 GSE9365 Expression data from barley maturing and germinating grains
7.3 98.5 GSM261043 before 3 days in mannitol medium rep2 GSE10330 Transcriptome analysis of barley anthers: effect of mannitol treatment on microspore embryogenesis
7.3 98.5 GSM238411 Pericarp 8DAF; seed development; Rep 2 GSE9365 Expression data from barley maturing and germinating grains
6.3 98.1 GSM238435 Embryo 24 h; Seed germination; Rep 2 GSE9365 Expression data from barley maturing and germinating grains
5.2 97.4 GSM419982 Seed_Rep2 GSE16754 Comparative transcriptional profiling of organs of the barley spike
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.02 4e-2 38 Contig11826_at Contig11826 - - 3e-5 At2g18250 ATCOAD (4-phosphopantetheine adenylyltransferase) C.G. S.X.
0.02 7e-1 34 Contig5202_at Contig5202 - - 2e-62 At1g20090 ROP2 (RHO-RELATED PROTEIN FROM PLANTS 2) C.G. S.X.
0.03 7e-1 34 Contig20269_at Contig20269 - - 1e+0 At5g55320 membrane bound O-acyl transferase (MBOAT) family protein / wax synthase-related C.G. S.X.
0.02 7e-1 34 Contig9880_s_at Contig9880 - - 7e-3 At1g61795 - C.G. S.X.
0.02 3e+0 32 Contig16954_at Contig16954 - - 3e-1 At1g80210 - C.G. S.X.
0.02 3e+0 32 Contig2173_s_at Contig2173 - - 8e-6 At1g20693 HMGB2 (HIGH MOBILITY GROUP B 2) C.G. S.X.
0.01 3e+0 32 Contig1803_at Contig1803 - - 1e-19 At3g10340 PAL4 (Phenylalanine ammonia-lyase 4) C.G. S.X.
0.02 3e+0 32 Contig18051_at Contig18051 - - 4e-1 At1g75250 ATRL6 (ARABIDOPSIS RAD-LIKE 6) C.G. S.X.
0.01 3e+0 32 Contig9403_at Contig9403 - - 3e-3 At3g09850 D111/G-patch domain-containing protein C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.02 1e+0 34 Arabidopsis thaliana At1g77480 844084 nucellin protein, putative F:aspartic-type endopeptidase activity;P:proteolysis;C:unknown;POFM - - - C.G. S.X.
0.27 5e-7 56 Glycine max GmaAffx.84208.1.S1_at AI441677 - - 1e-46 At3g26370 unknown protein C.G. S.X.
0.33 0 680 Oryza sativa Os06g0687400 AK072400.1 - Hypothetical plant protein family protein 2e-30 At3g26370 unknown protein C.G. S.X.
0.33 2e-9 63 Populus trichocarpa PtpAffx.989.1.A1_at CV257877 hypothetical protein - 7e-19 At3g26370 unknown protein C.G. S.X.
0.53 0 983 Triticum aestivum Ta.7977.1.S1_at BT009221.1 - - 1e-30 At3g26370 unknown protein C.G. S.X.
0.03 2e+0 32 Vitis vinifera 1618842_at CF514693 similar to TIP1 (TIP GROWTH DEFECTIVE 1) - 4e+0 At5g10430 AGP4 (ARABINOGALACTAN PROTEIN 4) C.G. S.X.
0.48 1e-168 591 Zea mays Zm.17582.1.A1_at BM080007 auxin-independent growth promoter-like protein - 2e-22 At3g26370 unknown protein C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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