CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Contig14075_at

Gene name

Organism Hordeum vulgare

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.59 75.8 Contig14075_at Contig14075 - - 6e-33 At2g41560 ACA4 (AUTO-INHIBITED CA(2+)-ATPASE, ISOFORM 4) S.X. H.G.
0.48 63.2 Contig6007_at Contig6007 - - 2e+1 At5g61412 unknown protein S.X. H.G.
0.46 61.0 Contig2302_at Contig2302 - - 1e-25 At5g60670 60S ribosomal protein L12 (RPL12C) S.X. H.G.
0.34 43.6 HX05P09r_at HX05P09r - - 9e-1 At5g60350 unknown protein S.X. H.G.
0.30 37.0 Contig10370_at Contig10370 - - 2e-12 At1g34370 STOP1 (sensitive to proton rhizotoxicity 1) S.X. H.G.
0.29 35.5 HM10K10r_at HM10K10r - - 2e-2 At3g10185 - S.X. H.G.
0.25 28.9 Contig15476_at Contig15476 - - 2e+0 At1g48325 Expressed protein S.X. H.G.
0.25 28.9 rbags25g01_at rbags25g01 - - 1e+0 At5g22880 HTB2 S.X. H.G.
0.19 19.6 Contig23388_at Contig23388 - - 6e-1 At1g70600 structural constituent of ribosome S.X. H.G.
0.16 15.3 HX01D24w_at HX01D24w - - 1e+0 At3g25400 - S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
27.4 99.8 GSM382232 Root_Hg1 GSE15295 Mercury toxicity in barley roots
16.0 99.6 GSM372967 genotype: Mla6 - pathogen isolates: K1 - time: 20 - rep3 GSE14930 Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene
14.3 99.5 GSM382235 Root_Control1 GSE15295 Mercury toxicity in barley roots
13.1 99.4 GSM382234 Root_Hg3 GSE15295 Mercury toxicity in barley roots
11.7 99.3 GSM382237 Root_Control3 GSE15295 Mercury toxicity in barley roots
10.9 99.2 GSM372945 genotype: Mla6 - pathogen isolates: 5874 - time: 16 - rep2 GSE14930 Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene
10.6 99.2 GSM146362 Golden Promise Root Salt, biological rep 3 GSE6325 Array-based genotyping and expression analysis of barley cv. Maythorpe and Golden Promise
10.3 99.1 GSM382236 Root_Control2 GSE15295 Mercury toxicity in barley roots
9.7 99.0 GSM146358 Golden Promise Root Control, biological rep 2 GSE6325 Array-based genotyping and expression analysis of barley cv. Maythorpe and Golden Promise
9.7 99.0 GSM372966 genotype: Mla6 - pathogen isolates: K1 - time: 20 - rep2 GSE14930 Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.19 1e-23 111 Contig11449_at Contig11449 - - 9e-29 At3g57330 ACA11 (autoinhibited Ca2+-ATPase 11) C.G. S.X.
0.08 4e-14 79 Contig9357_at Contig9357 - - 2e-42 At1g27770 ACA1 (AUTO-INHIBITED CA2+-ATPASE 1) C.G. S.X.
0.11 6e-10 65 Contig14714_at Contig14714 P-type ATPase - 3e-68 At2g22950 calcium-transporting ATPase, plasma membrane-type, putative / Ca2+-ATPase, putative (ACA7) C.G. S.X.
0.02 1e-4 48 Contig6173_at Contig6173 - - 2e-36 At3g21180 ACA9 (AUTOINHIBITED CA(2+)-ATPASE 9) C.G. S.X.
0.04 3e-2 40 Contig25293_at Contig25293 - - 5e-52 At3g21180 ACA9 (AUTOINHIBITED CA(2+)-ATPASE 9) C.G. S.X.
0.01 2e+0 34 Contig10511_at Contig10511 - - 2e-5 At1g34320 unknown protein C.G. S.X.
0.01 2e+0 34 HB03M23r_at HB03M23r - - 5e+0 At3g46613 RTFL4 (ROTUNDIFOLIA LIKE 4) C.G. S.X.
0.01 2e+0 34 Contig25218_at Contig25218 - - 9e-8 At4g35220 cyclase family protein C.G. S.X.
0.01 2e+0 34 Contig17375_at Contig17375 - - 2e-1 At3g47543 unknown protein C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.17 6e-33 143 Arabidopsis thaliana At2g41560 818754 ACA4 (AUTO-INHIBITED CA(2+)-ATPASE, ISOFORM 4) encodes a calmodulin-regulated Ca(2+)-ATPase that improves salt tolerance in yeast. localized to the vacuole. - - - C.G. S.X.
0.17 1e-28 129 Glycine max Gma.6344.1.S1_s_at BU765544 - - 5e-63 At2g41560 ACA4 (AUTO-INHIBITED CA(2+)-ATPASE, ISOFORM 4) C.G. S.X.
0.19 1e-32 143 Oryza sativa Os11g0140400 9640.m00336 - Calcium-translocating P-type ATPase, PMCA-typefamily protein 2e-24 At3g57330 ACA11 (autoinhibited Ca2+-ATPase 11) C.G. S.X.
0.09 3e-20 101 Populus trichocarpa PtpAffx.203527.1.S1_at pmrna7009 autoinhibited calcium ATPase - 9e-27 At2g41560 ACA4 (AUTO-INHIBITED CA(2+)-ATPASE, ISOFORM 4) C.G. S.X.
0.22 1e-18 95 Triticum aestivum Ta.10263.1.S1_at CA703693 - - 1e-35 At2g41560 ACA4 (AUTO-INHIBITED CA(2+)-ATPASE, ISOFORM 4) C.G. S.X.
0.08 1e-12 73 Vitis vinifera 1613997_at CB970314 hypothetical protein LOC100246545 - 3e-13 At3g57330 ACA11 (autoinhibited Ca2+-ATPase 11) C.G. S.X.
0.04 5e-7 56 Zea mays Zm.17277.1.S1_at CF273093 - - 1e-45 At5g57110 ACA8 (AUTOINHIBITED CA2+ -ATPASE, ISOFORM 8) C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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