Gene omics information

Query gene ID	Contig14053_at
Gene name
Organism	Hordeum vulgare

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.67	84.7	Contig14053_at	Contig14053	-	-	3e-1	At2g45760	BAP2 (BON ASSOCIATION PROTEIN 2)	S.X.	H.G.	Please select
0.56	74.3	Contig13428_at	Contig13428	-	-	6e-5	At3g17160	unknown protein	S.X.	H.G.	Please select
0.55	72.0	Contig13965_at	Contig13965	-	-	7e+0	At5g55056	unknown protein	S.X.	H.G.	Please select
0.50	66.9	Contig14949_at	Contig14949	-	-	3e-2	At3g19100	calcium-dependent protein kinase, putative / CDPK, putative	S.X.	H.G.	Please select
0.40	53.1	HO14K20S_at	HO14K20S	-	-	8e-1	At2g16930	ribosomal protein L27 family protein	S.X.	H.G.	Please select
0.40	53.1	Contig12506_at	Contig12506	-	-	2e+0	At4g31740	-	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
9.9	99.1	GSM372949	genotype: Mla6 - pathogen isolates: 5874 - time: 20 - rep3	GSE14930	Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene
9.0	98.9	GSM372967	genotype: Mla6 - pathogen isolates: K1 - time: 20 - rep3	GSE14930	Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene
8.7	98.9	GSM372945	genotype: Mla6 - pathogen isolates: 5874 - time: 16 - rep2	GSE14930	Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene
8.6	98.8	GSM372985	genotype: 11542 - pathogen isolates: 5874 - time: 20 - rep3	GSE14930	Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene
8.3	98.8	GSM372988	genotype: 11542 - pathogen isolates: 5874 - time: 24 - rep3	GSE14930	Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene
7.5	98.6	GSM372984	genotype: 11542 - pathogen isolates: 5874 - time: 20 - rep2	GSE14930	Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene
7.4	98.5	GSM373003	genotype: 11542 - pathogen isolates: K1 - time: 20 - rep3	GSE14930	Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene
7.3	98.5	GSM372982	genotype: 11542 - pathogen isolates: 5874 - time: 16 - rep3	GSE14930	Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene
7.2	98.5	GSM372981	genotype: 11542 - pathogen isolates: 5874 - time: 16 - rep2	GSE14930	Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene
6.9	98.3	GSM372966	genotype: Mla6 - pathogen isolates: K1 - time: 20 - rep2	GSE14930	Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.02	4e-2	38	Contig9804_at	Contig9804	-	-	2e-3	At3g19910	zinc finger (C3HC4-type RING finger) family protein	C.G.	S.X.	Please select
0.02	7e-1	34	Contig14965_at	Contig14965	-	-	2e-6	At5g19910	SOH1 family protein	C.G.	S.X.	Please select
0.01	7e-1	34	Contig3756_at	Contig3756	-	-	4e-31	At3g12860	nucleolar protein Nop56, putative	C.G.	S.X.	Please select
0.02	7e-1	34	Contig12147_at	Contig12147	-	-	2e-3	At5g64260	EXL2 (EXORDIUM LIKE 2)	C.G.	S.X.	Please select
0.02	7e-1	34	Contig9612_s_at	Contig9612	-	-	7e-1	At5g09540	DNAJ heat shock N-terminal domain-containing protein	C.G.	S.X.	Please select
0.01	7e-1	34	Contig5507_at	Contig5507	-	-	5e-45	At4g24820	26S proteasome regulatory subunit, putative (RPN7)	C.G.	S.X.	Please select
0.02	7e-1	34	Contig5337_at	Contig5337	-	-	7e-1	At5g64250	2-nitropropane dioxygenase family / NPD family	C.G.	S.X.	Please select
0.02	7e-1	34	Contig4557_at	Contig4557	-	-	9e-2	At1g15340	MBD10	C.G.	S.X.	Please select
0.02	7e-1	34	Contig2876_at	Contig2876	-	-	5e-2	At5g17120	-	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.03	3e-1	36	Arabidopsis thaliana	At2g45760	819184	BAP2 (BON ASSOCIATION PROTEIN 2)	encodes a protein that is similar to BONZAI1-binding protein BAP1.	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.03	2e+0	34	Glycine max	PsAffx.psMA015xF16f_at	PsAffx.psMA015xF16f	-	-	3e-1	At4g22890	PGR5-LIKE A	C.G.	S.X.	Please select
0.28	2e-99	363	Oryza sativa	Os08g0545000	AK121240.1	-	Conserved hypothetical protein	2e-2	At4g33520	PAA1 (P-TYPE ATP-ASE 1)	C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.03	2e+0	34	Populus trichocarpa	PtpAffx.223815.1.S1_at	pmrna42017	hypothetical protein	-	2e-1	At3g51890	protein binding / structural molecule	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.75	0	942	Triticum aestivum	Ta.9263.1.S1_at	BJ291271	-	-	2e+0	At4g36740	ATHB40 (ARABIDOPSIS THALIANA HOMEOBOX PROTEIN 40)	C.G.	S.X.	Please select
0.03	2e+0	32	Vitis vinifera	1615157_at	CF414560	-	-	4e+0	At3g53330	plastocyanin-like domain-containing protein	C.G.	S.X.	Please select
0.25	1e-51	202	Zea mays	Zm.1275.1.S1_at	CD953604	hypothetical protein LOC100280069	-	3e+0	At4g31580	SRZ-22	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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