Gene omics information

Query gene ID	Contig14045_at
Gene name
Organism	Hordeum vulgare

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.82	93.1	Contig14045_at	Contig14045	-	-	2e-18	At3g03690	UNE7 (unfertilized embryo sac 7)	S.X.	H.G.	Please select
0.78	91.2	Contig14043_at	Contig14043	-	-	3e-1	At3g18300	unknown protein	S.X.	H.G.	Please select
0.38	49.5	Contig8813_at	Contig8813	-	-	4e-23	At5g42990	UBC18 (ubiquitin-conjugating enzyme 18)	S.X.	H.G.	Please select
0.35	45.1	HVSMEm0017N09r2_at	HVSMEm0017N09r2	-	-	4e+0	At4g25720	QC (GLUTAMINYL CYCLASE)	S.X.	H.G.	Please select
0.35	45.1	Contig18349_at	Contig18349	-	-	1e-1	At4g14770	TCX2 (TESMIN/TSO1-LIKE CXC 2)	S.X.	H.G.	Please select
0.33	42.6	EBem05_SQ003_E07_at	EBem05_SQ003_E07	-	-	5e-2	At1g27710	glycine-rich protein	S.X.	H.G.	Please select
0.31	38.6	Contig8812_s_at	Contig8812	-	-	2e+0	At2g03710	SEP4 (SEPALLATA 4)	S.X.	H.G.	Please select
0.28	35.5	Contig23097_at	Contig23097	-	-	6e-2	At3g60600	VAP (VESICLE ASSOCIATED PROTEIN)	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
13.2	99.4	GSM238428	Embryo 16DAF; Seed development; Rep 1	GSE9365	Expression data from barley maturing and germinating grains
10.6	99.2	GSM238429	Embryo 16DAF; Seed development; Rep 2	GSE9365	Expression data from barley maturing and germinating grains
9.1	98.9	GSM238431	Embryo 25DAF; Seed development; Rep 2	GSE9365	Expression data from barley maturing and germinating grains
7.8	98.6	GSM238430	Embryo 25DAF; Seed development; Rep 1	GSE9365	Expression data from barley maturing and germinating grains
6.6	98.2	GSM146379	Maythorpe shoot Salt, biological rep 2	GSE6325	Array-based genotyping and expression analysis of barley cv. Maythorpe and Golden Promise
6.0	97.9	GSM146373	Golden Promise shoot Salt, biological rep 2	GSE6325	Array-based genotyping and expression analysis of barley cv. Maythorpe and Golden Promise
5.8	97.8	GSM238434	Embryo 24 h; Seed germination; Rep 1	GSE9365	Expression data from barley maturing and germinating grains
5.6	97.7	GSM146380	Maythorpe shoot Salt, biological rep 3	GSE6325	Array-based genotyping and expression analysis of barley cv. Maythorpe and Golden Promise
5.5	97.6	GSM238435	Embryo 24 h; Seed germination; Rep 2	GSE9365	Expression data from barley maturing and germinating grains
5.4	97.5	GSM146361	Golden Promise Root Salt, biological rep 2	GSE6325	Array-based genotyping and expression analysis of barley cv. Maythorpe and Golden Promise

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.09	1e-6	54	Contig13899_at	Contig13899	-	-	3e-1	At4g27480	glycosyltransferase family 14 protein / core-2/I-branching enzyme family protein	C.G.	S.X.	Please select
0.14	2e-4	46	Contig13582_at	Contig13582	-	-	2e-4	At3g03690	UNE7 (unfertilized embryo sac 7)	C.G.	S.X.	Please select
0.01	1e-2	40	Contig6489_at	Contig6489	-	-	4e-4	At5g60410	SIZ1	C.G.	S.X.	Please select
0.02	2e-1	36	Contig10242_at	Contig10242	-	-	2e-5	At1g78700	brassinosteroid signalling positive regulator-related	C.G.	S.X.	Please select
0.01	9e-1	34	Contig11673_at	Contig11673	-	-	7e-8	At2g35720	DNAJ heat shock N-terminal domain-containing protein	C.G.	S.X.	Please select
0.02	9e-1	34	Contig12071_at	Contig12071	-	-	6e-1	At5g60360	AALP (Arabidopsis aleurain-like protease)	C.G.	S.X.	Please select
0.02	9e-1	34	Contig25766_at	Contig25766	-	-	7e-18	At2g36230	APG10 (ALBINO AND PALE GREEN 10)	C.G.	S.X.	Please select
0.02	9e-1	34	Contig10144_s_at	Contig10144	-	-	1e-13	At1g52510	hydrolase, alpha/beta fold family protein	C.G.	S.X.	Please select
0.02	9e-1	34	Contig10144_at	Contig10144	-	-	1e-13	At1g52510	hydrolase, alpha/beta fold family protein	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.08	2e-18	93	Arabidopsis thaliana	At3g03690	821186	UNE7 (unfertilized embryo sac 7)	F:transferase activity, transferring glycosyl groups, acetylglucosaminyltransferase activity;P:carbohydrate biosynthetic process, double fertilization forming a zygote and endosperm, pollen tube development;C:endomembrane system, membrane;MPBVO	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.14	3e-9	63	Glycine max	GmaAffx.37997.1.S1_at	BU550868	-	-	3e-20	At5g15050	glycosyltransferase family 14 protein / core-2/I-branching enzyme family protein	C.G.	S.X.	Please select
0.35	2e-48	194	Oryza sativa	Os03g0692000	9631.m04726	-	Glycosyl transferase, family 14 protein	7e-4	At5g15050	glycosyltransferase family 14 protein / core-2/I-branching enzyme family protein	C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.16	6e-1	36	Populus trichocarpa	PtpAffx.205088.1.S1_at	pmrna10083	hypothetical protein	-	2e-3	At5g15050	glycosyltransferase family 14 protein / core-2/I-branching enzyme family protein	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.76	0	1011	Triticum aestivum	Ta.12174.1.A1_at	CD452810	-	-	1e-14	At3g03690	UNE7 (unfertilized embryo sac 7)	C.G.	S.X.	Please select
0.08	6e-10	63	Vitis vinifera	1616079_at	CD801867	hypothetical LOC100255014	-	3e-21	At4g03340	glycosyltransferase family 14 protein / core-2/I-branching enzyme family protein	C.G.	S.X.	Please select
0.35	3e-31	135	Zea mays	Zm.6873.1.A1_at	CK369786	-	-	2e+1	At4g08870	arginase, putative	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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