Gene omics information

Query gene ID	Contig1403_at
Gene name
Organism	Hordeum vulgare

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.91	98.1	Contig1403_at	Contig1403	-	-	1e-2	At3g26430	GDSL-motif lipase/hydrolase family protein	S.X.	H.G.	Please select
0.73	88.7	Contig5555_at	Contig5555	-	-	1e-55	At1g80560	3-isopropylmalate dehydrogenase, chloroplast, putative	S.X.	H.G.	Please select
0.73	88.7	Contig5026_at	Contig5026	-	-	3e-4	At1g51400	photosystem II 5 kD protein	S.X.	H.G.	Please select
0.63	80.3	Contig2265_at	Contig2265	-	-	4e-3	At1g72970	HTH (HOTHEAD)	S.X.	H.G.	Please select
0.50	66.9	HD05F01r_at	HD05F01r	-	-	2e+1	Atcg00540	-	S.X.	H.G.	Please select
0.37	47.9	Contig21078_at	Contig21078	-	-	6e-1	At1g77765	unknown protein	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
56.2	100.0	GSM215732	gibberellin plus Yariv-reagent treatment rep2	GSE8712	The effects of Yariv-reagent on barley aleurone GA signaling
50.2	99.9	GSM215729	gibberellin plus Yariv-reagent treatment rep1	GSE8712	The effects of Yariv-reagent on barley aleurone GA signaling
33.3	99.9	GSM215727	Control (DMSO) treatment rep1	GSE8712	The effects of Yariv-reagent on barley aleurone GA signaling
17.8	99.7	GSM215728	gibberellin treatment rep1	GSE8712	The effects of Yariv-reagent on barley aleurone GA signaling
16.8	99.6	GSM215730	Control (DMSO) treatment rep2	GSE8712	The effects of Yariv-reagent on barley aleurone GA signaling
13.3	99.4	GSM440966	Stressed palea_Rep1	GSE17669	Gene expression in the barley spike during drought stress
9.2	99.0	GSM161148	7% SWC rep3	GSE6990	Barley drought stress
8.8	98.9	GSM71142	OWB-R stress replicate 1	GSE3170	Barley single feature polymorphisms and drought stress gene expression
6.8	98.3	GSM440968	Stressed palea_Rep3	GSE17669	Gene expression in the barley spike during drought stress
5.9	97.9	GSM71143	OWB-R stress replicate 2	GSE3170	Barley single feature polymorphisms and drought stress gene expression

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.82	0	1616	Contig1404_x_at	Contig1404	-	-	1e-2	At3g05180	GDSL-motif lipase/hydrolase family protein	C.G.	S.X.	Please select
0.82	0	1616	Contig1404_at	Contig1404	-	-	1e-2	At3g05180	GDSL-motif lipase/hydrolase family protein	C.G.	S.X.	Please select
0.69	0	979	Contig1402_at	Contig1402	-	-	7e-1	At3g26430	GDSL-motif lipase/hydrolase family protein	C.G.	S.X.	Please select
0.33	3e-112	404	rbaal3h01_at	rbaal3h01	-	-	5e-12	At1g04410	malate dehydrogenase, cytosolic, putative	C.G.	S.X.	Please select
0.02	8e-5	48	Contig12684_at	Contig12684	-	-	4e-2	At1g28590	lipase, putative	C.G.	S.X.	Please select
0.04	3e-4	46	Contig7253_at	Contig7253	-	-	2e-1	At1g28650	lipase, putative	C.G.	S.X.	Please select
0.02	1e-3	44	Contig3023_s_at	Contig3023	-	-	2e-1	At3g49850	TRB3 (TELOMERE REPEAT BINDING FACTOR 3)	C.G.	S.X.	Please select
0.02	1e-3	44	Contig4897_at	Contig4897	-	-	8e-1	At1g04445	zinc finger (C2H2 type) family protein	C.G.	S.X.	Please select
0.05	1e-3	44	Contig3024_at	Contig3024	-	-	3e+0	At3g13310	DNAJ heat shock N-terminal domain-containing protein	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.02	1e-2	42	Arabidopsis thaliana	At3g26430	822247	GDSL-motif lipase/hydrolase family protein	F:hydrolase activity, acting on ester bonds, carboxylesterase activity;P:lipid metabolic process;C:endomembrane system;PBFOM	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.03	2e-1	38	Glycine max	GmaAffx.26740.1.S1_at	BU081089	-	-	8e-1	At3g26430	GDSL-motif lipase/hydrolase family protein	C.G.	S.X.	Please select
0.47	3e-35	151	Oryza sativa	Os07g0586100	AK071404.1	-	Esterase precursor (EC 3.1.1.-) (Earlynodule-specific protein homolog) (Latex allergen Hev b13)	1e-8	At3g26430	GDSL-motif lipase/hydrolase family protein	C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.06	2e-1	38	Populus trichocarpa	PtpAffx.130551.1.S1_at	DN501005	hypothetical protein	-	2e-8	At1g67830	ATFXG1 (alpha-fucosidase 1)	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.57	0	805	Triticum aestivum	Ta.5834.2.S1_at	CK206721	-	-	1e-3	At3g26430	GDSL-motif lipase/hydrolase family protein	C.G.	S.X.	Please select
0.02	8e-1	34	Vitis vinifera	1616923_s_at	CB919379	-	-	3e-1	At3g55790	unknown protein	C.G.	S.X.	Please select
0.33	9e-17	87	Zea mays	Zm.18541.1.S1_at	CO528387	hypothetical protein ache	-	3e-3	At3g26430	GDSL-motif lipase/hydrolase family protein	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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