CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Contig13965_at

Gene name

Organism Hordeum vulgare

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.77 90.8 Contig13965_at Contig13965 - - 7e+0 At5g55056 unknown protein S.X. H.G.
0.67 84.7 HX07O15r_at HX07O15r - - 4e+0 At5g05470 EIF2 ALPHA S.X. H.G.
0.60 77.3 Contig26019_at Contig26019 - - 3e+0 At2g29650 PHT4 S.X. H.G.
0.60 77.3 Contig21865_at Contig21865 - - 9e-1 At5g45870 Bet v I allergen family protein S.X. H.G.
0.55 72.0 Contig14949_at Contig14949 - - 3e-2 At3g19100 calcium-dependent protein kinase, putative / CDPK, putative S.X. H.G.
0.46 61.0 Contig13428_at Contig13428 - - 6e-5 At3g17160 unknown protein S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
13.8 99.5 GSM372989 genotype: 11542 - pathogen isolates: 5874 - time: 32 - rep1 GSE14930 Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene
12.0 99.3 GSM372985 genotype: 11542 - pathogen isolates: 5874 - time: 20 - rep3 GSE14930 Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene
11.6 99.3 GSM372991 genotype: 11542 - pathogen isolates: 5874 - time: 32 - rep3 GSE14930 Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene
11.3 99.3 GSM372945 genotype: Mla6 - pathogen isolates: 5874 - time: 16 - rep2 GSE14930 Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene
11.2 99.2 GSM372984 genotype: 11542 - pathogen isolates: 5874 - time: 20 - rep2 GSE14930 Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene
10.6 99.2 GSM372995 genotype: 11542 - pathogen isolates: K1 - time: 8 - rep1 GSE14930 Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene
9.9 99.1 GSM372990 genotype: 11542 - pathogen isolates: 5874 - time: 32 - rep2 GSE14930 Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene
8.9 98.9 GSM372988 genotype: 11542 - pathogen isolates: 5874 - time: 24 - rep3 GSE14930 Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene
8.3 98.8 GSM373008 genotype: 11542 - pathogen isolates: K1 - time: 32 - rep2 GSE14930 Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene
8.3 98.8 GSM373002 genotype: 11542 - pathogen isolates: K1 - time: 20 - rep2 GSE14930 Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.10 3e-31 135 Contig26103_at Contig26103 - - 1e-1 At5g51580 unknown protein C.G. S.X.
0.09 7e-17 87 Contig22236_at Contig22236 - - 1e-1 At2g37300 unknown protein C.G. S.X.
0.10 4e-12 71 Contig18858_at Contig18858 - - 3e+0 At3g06300 AT-P4H-2 (A. THALIANA P4H ISOFORM 2) C.G. S.X.
0.06 4e-12 71 Contig10653_at Contig10653 - - 2e+0 At5g57660 zinc finger (B-box type) family protein C.G. S.X.
0.04 1e-9 63 Contig12452_at Contig12452 - - 1e-1 At3g28956 catalytic/ nucleotide binding C.G. S.X.
0.09 1e-9 63 Contig20711_at Contig20711 - - 1e+0 At3g50337 unknown protein C.G. S.X.
0.04 1e-9 63 Contig12452_s_at Contig12452 - - 1e-1 At3g28956 catalytic/ nucleotide binding C.G. S.X.
0.08 4e-9 61 HF21E11r_at HF21E11r - - 1e+0 At5g48657 defense protein-related C.G. S.X.
0.09 6e-8 57 Contig18240_at Contig18240 - - 1e+0 At2g26500 cytochrome b6f complex subunit (petM), putative C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.03 7e+0 32 Arabidopsis thaliana At5g55056 6240560 unknown protein F:unknown;P:unknown;C:unknown - - - C.G. S.X.
0.03 2e-1 38 Glycine max GmaAffx.65711.1.S1_at BE657461 - - 3e-1 At5g16760 inositol 1,3,4-trisphosphate 5/6-kinase C.G. S.X.
0.03 2e-1 38 Oryza sativa OsAffx.7664.1.S1_at - - - 0 C.G. S.X.
0.02 6e-1 36 Populus trichocarpa Ptp.4932.1.S1_s_at BI126346 hypothetical protein - 4e-1 At1g69390 ATMINE1 (Arabidopsis homologue of bacterial MinE 1) C.G. S.X.
0.09 5e-4 46 Triticum aestivum Ta.17187.1.S1_at CA618637 - - 3e+0 At4g28330 unknown protein C.G. S.X.
0.02 2e+0 32 Vitis vinifera 1610838_at CB974802 hypothetical protein LOC100241906 - 4e+0 At4g10430 - C.G. S.X.
0.03 3e+0 32 Zea mays Zm.9977.1.S1_at AY108587.1 hypothetical protein LOC100272895 - 8e+0 At4g03520 ATHM2 C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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