Gene omics information

Query gene ID Contig13805_at
Gene name
Organism Hordeum vulgare


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.5572.0Contig13805_atContig13805--5e-1At2g40080ELF4 (EARLY FLOWERING 4)S.X.H.G.
0.7388.7Contig20488_atContig20488--3e-1At1g30540ATPase, BadF/BadG/BcrA/BcrD-type familyS.X.H.G.
0.5975.8Contig15003_atContig15003--5e-1At4g37608unknown proteinS.X.H.G.
0.5066.9Contig22235_atContig22235--2e+1At5g15560unknown proteinS.X.H.G.
0.4053.1Contig26418_atContig26418--2e+0At4g32260ATP synthase familyS.X.H.G.
0.3342.6Contig20907_atContig20907--2e+0At4g18425unknown proteinS.X.H.G.
Click here to hide the above table.


Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
48.699.9GSM419979Awn_Rep2GSE16754Comparative transcriptional profiling of organs of the barley spike
48.699.9GSM440970Control awn_Rep2GSE17669Gene expression in the barley spike during drought stress
13.599.5GSM382236Root_Control2GSE15295Mercury toxicity in barley roots
12.999.4GSM419980Awn_Rep3GSE16754Comparative transcriptional profiling of organs of the barley spike
12.999.4GSM440971Control awn_Rep3GSE17669Gene expression in the barley spike during drought stress
11.699.3GSM419976Palea_Rep2GSE16754Comparative transcriptional profiling of organs of the barley spike
11.699.3GSM440964Control palea_Rep2GSE17669Gene expression in the barley spike during drought stress
9.198.9GSM16082319% SWC rep1GSE6990Barley drought stress
7.198.4GSM261028ABA-Late-rep2GSE10328ABA experiment
6.998.3GSM431548pathogen isolates: Mock - rep3GSE17238Response of barley roots during the host interaction with the plasmodiophorid virus vector Polymyxa graminis
Click here to hide the above table.


Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.012e-240Contig3718_s_atContig3718--2e-9At3g25690CHUP1 (CHLOROPLAST UNUSUAL POSITIONING 1)C.G.S.X.
0.022e-240Contig16114_atContig16114--5e-1At4g33585unknown proteinC.G.S.X.
0.022e-136Contig11148_atContig11148--1e+0At3g05800transcription factorC.G.S.X.
0.012e-136Contig13793_atContig13793--4e-4At4g08160glycosyl hydrolase family 10 protein / carbohydrate-binding domain-containing proteinC.G.S.X.
0.012e-136Contig13792_s_atContig13792--4e+0At5g41614unknown proteinC.G.S.X.
0.022e-136Contig5626_s_atContig5626--2e+0At5g50260cysteine proteinase, putativeC.G.S.X.
0.021e+034EBem04_SQ004_P22_atEBem04_SQ004_P22--4e-3At5g06230unknown proteinC.G.S.X.
0.011e+034Contig2474_atContig2474--2e-1At1g80240unknown proteinC.G.S.X.
0.031e+034Contig21755_atContig21755--7e-2At2g40320unknown proteinC.G.S.X.
Click here to hide the above table.



Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.035e-136Arabidopsis thalianaAt2g40080818596ELF4 (EARLY FLOWERING 4)Encodes a novel nuclear 111 amino-acid phytochrome-regulated component of a negative feedback loop involving the circadian clock central oscillator components CCA1 and LHY. ELF4 is necessary for light-induced expression of both CCA1 and LHY, and conversely, CCA1 and LHY act negatively on light-induced ELF4 expression. ELF4 promotes clock accuracy and is required for sustained rhythms in the absence of daily light/dark cycles. It is involved in the phyB-mediated constant red light induced seedling de-etiolation process and may function to coregulate the expression of a subset of phyB-regulated genes.---C.G.S.X.
0.023e+034Glycine maxPsAffx.CL1002Contig1_s_atPsAffx.CL1002Contig1--4e+0At4g35725unknown proteinC.G.S.X.
0.489e-106385Oryza sativaOs06g0234600AK063415.1-Protein of unknown function DUF231 domaincontaining protein3e+0At5g40180unknown proteinC.G.S.X.
0.034e-240Populus trichocarpaPtpAffx.218222.1.S1_atpmrna33772hypothetical protein-1e-2At2g28671unknown proteinC.G.S.X.
0.031e-138Triticum aestivumTa.27021.1.A1_atCD452465--4e-1At3g55990ESK1 (ESKIMO 1)C.G.S.X.
0.021e-136Vitis vinifera1608404_atCF519044--4e+0At2g39960microsomal signal peptidase 25 kDa subunit, putative (SPC25)C.G.S.X.
0.054e-652Zea maysZm.12160.1.S1_atCO532241hypothetical protein LOC100277263-5e-2At5g40180unknown proteinC.G.S.X.
Click here to hide the above table.


Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
Click here to hide the above table.


Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
Click here to hide the above table.



Back to the CoP portal site

Back to the KAGIANA project homepage