Gene omics information

Query gene ID Contig13776_at
Gene name
Organism Hordeum vulgare


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.7689.8Contig13776_atContig13776--4e-10At1g77760NIA1 (NITRATE REDUCTASE 1)S.X.H.G.
0.6279.1Contig26093_atContig26093--3e-1At1g70895CLE17 (CLAVATA3/ESR-RELATED 17)S.X.H.G.
0.5268.3Contig19776_atContig19776--1e+0At2g3760060S ribosomal protein L36 (RPL36A)S.X.H.G.
0.5066.9Contig20448_atContig20448--2e-6At4g39010AtGH9B18 (Arabidopsis thaliana glycosyl hydrolase 9B18)S.X.H.G.
0.5066.9HV_CEb0006G02r2_atHV_CEb0006G02r2--2e+1At1g04550IAA12 (AUXIN-INDUCED PROTEIN 12)S.X.H.G.
0.4559.3Contig13274_atContig13274--9e-3At1g71690unknown proteinS.X.H.G.
0.4458.9HT10K14u_atHT10K14u--1e-6At1g09230RNA recognition motif (RRM)-containing proteinS.X.H.G.
0.4255.2Contig23308_atContig23308--1e+0At3g13820F-box family proteinS.X.H.G.
0.3950.5HU05N01u_atHU05N01u--1e+0At5g19830aminoacyl-tRNA hydrolaseS.X.H.G.
0.3647.1Contig3976_atContig3976--5e+0At5g33330RNase H domain-containing proteinS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
65.3100.0GSM146362Golden Promise Root Salt, biological rep 3GSE6325Array-based genotyping and expression analysis of barley cv. Maythorpe and Golden Promise
65.3100.0GSM146368Maythorpe Root Salt, biological rep 3GSE6325Array-based genotyping and expression analysis of barley cv. Maythorpe and Golden Promise
24.099.8GSM146359Golden Promise Root Control, biological rep 3GSE6325Array-based genotyping and expression analysis of barley cv. Maythorpe and Golden Promise
22.699.8GSM146365Maythorpe Root Control, biological rep 3GSE6325Array-based genotyping and expression analysis of barley cv. Maythorpe and Golden Promise
15.299.5GSM213441Barley seeds control in Hoagland solution for 12hrGSE8618P. aeruginosa virulent factor to barley
13.699.5GSM146367Maythorpe Root Salt, biological rep 2GSE6325Array-based genotyping and expression analysis of barley cv. Maythorpe and Golden Promise
8.998.9GSM213443Barley seeds with P. aeruginosa PA5021 mutant for 12hrGSE8618P. aeruginosa virulent factor to barley
8.898.9GSM213436Barley seeds with P. aeruginosa PAO1 for 12hrGSE8618P. aeruginosa virulent factor to barley
8.498.8GSM382237Root_Control3GSE15295Mercury toxicity in barley roots
7.598.6GSM215730Control (DMSO) treatment rep2GSE8712The effects of Yariv-reagent on barley aleurone GA signaling
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.512e-84313Contig8716_atContig8716--3e-5At1g37130NIA2 (NITRATE REDUCTASE 2)C.G.S.X.
0.091e-73278EBma05_SQ003_C16_s_atEBma05_SQ003_C16--1e+0At1g12660-C.G.S.X.
0.012e-448Contig2347_atContig2347--3e-4At3g18070BGLU43 (BETA GLUCOSIDASE 43)C.G.S.X.
0.013e-344Contig1019_atContig1019--2e-79At2g39730RCA (RUBISCO ACTIVASE)C.G.S.X.
0.011e-242Contig694_atContig694--5e-6At1g32900starch synthase, putativeC.G.S.X.
0.011e-242Contig18848_atContig18848--1e-1At4g36780transcription regulatorC.G.S.X.
0.012e-138HVSMEk0003I10r2_x_atHVSMEk0003I10r2--2e+1At5g44730haloacid dehalogenase-like hydrolase family proteinC.G.S.X.
0.012e-138Contig1075_atContig1075--7e+0At4g36500unknown proteinC.G.S.X.
0.012e-138Contig7101_atContig7101--9e-1At5g19485transferaseC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.084e-1067Arabidopsis thalianaAt1g77760844112NIA1 (NITRATE REDUCTASE 1)Encodes the cytosolic minor isoform of nitrate reductase (NR). Involved in the first step of nitrate assimilation, it contributes about 15% of the nitrate reductase activity in shoots. Similar to molybdopterin oxidoreductases at the N-terminus, and to FAD/NAD-binding cytochrome reductases at the C-terminus. Cofactors: FAD, heme iron (cytochrome B-557), and molybdenum-pterin.---C.G.S.X.
0.201e-23113Glycine maxGma.1221.1.S1_s_atL23854.1nitrate reductase-4e-10At1g77760NIA1 (NITRATE REDUCTASE 1)C.G.S.X.
0.7601762Oryza sativaOs02g0770800AK102178.1-Nitrate reductase [NAD(P)H] (EC 1.7.1.2)5e-16At1g77760NIA1 (NITRATE REDUCTASE 1)C.G.S.X.
0.084e-26121Populus trichocarpaPtpAffx.102478.1.A1_atAJ770564hypothetical protein-1e-3At1g77760NIA1 (NITRATE REDUCTASE 1)C.G.S.X.
0.342e-64248Triticum aestivumTa.5633.1.S1_a_atBG904383--3e-4At1g37130NIA2 (NITRATE REDUCTASE 2)C.G.S.X.
0.087e-37155Vitis vinifera1615159_s_atCD711821similar to nitrate reductase-3e-26At1g37130NIA2 (NITRATE REDUCTASE 2)C.G.S.X.
0.487e-81301Zea maysZm.1826.1.A1_atAW461127nitrate reductase-8e-21At1g37130NIA2 (NITRATE REDUCTASE 2)C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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