Gene omics information

Query gene ID Contig1373_at
Gene name
Organism Hordeum vulgare


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.6178.7Contig1373_atContig1373--4e-40At2g02000GAD3 (glutamate decarboxylase 3)S.X.H.G.
0.6380.3Contig8979_atContig8979--7e-7At5g58490cinnamoyl-CoA reductase familyS.X.H.G.
0.5572.0Contig2596_atContig2596--1e-114At1g29310P-P-bond-hydrolysis-driven protein transmembrane transporterS.X.H.G.
0.5066.9Contig2753_atContig2753--7e-1At5g41600BTI3 (VIRB2-INTERACTING PROTEIN 3)S.X.H.G.
0.4053.1Contig20730_s_atContig20730--5e-3At1g73885unknown proteinS.X.H.G.
0.3545.1Contig14183_s_atContig14183--1e+0At3g05170phosphoglycerate/bisphosphoglycerate mutase family proteinS.X.H.G.
0.3342.6Contig44_atContig44--3e-23At5g02500HSC70-1 (HEAT SHOCK COGNATE PROTEIN 70-1)S.X.H.G.
0.3240.3Contig4539_atContig4539--3e-10At5g26830threonyl-tRNA synthetase / threonine--tRNA ligase (THRRS)S.X.H.G.
0.2528.9Contig19817_s_atContig19817--5e+0At5g49050-S.X.H.G.
0.2528.9Contig12345_atContig12345--2e-29At4g17300NS1S.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
44.399.9GSM213443Barley seeds with P. aeruginosa PA5021 mutant for 12hrGSE8618P. aeruginosa virulent factor to barley
42.299.9GSM213436Barley seeds with P. aeruginosa PAO1 for 12hrGSE8618P. aeruginosa virulent factor to barley
25.299.8GSM238434Embryo 24 h; Seed germination; Rep 1GSE9365Expression data from barley maturing and germinating grains
24.899.8GSM213441Barley seeds control in Hoagland solution for 12hrGSE8618P. aeruginosa virulent factor to barley
18.099.7GSM238436Embryo 48 h; Seed germination; Rep 1GSE9365Expression data from barley maturing and germinating grains
17.399.6GSM431549pathogen isolates: Polymyxa graminis - rep1GSE17238Response of barley roots during the host interaction with the plasmodiophorid virus vector Polymyxa graminis
11.299.2GSM261045after 3 days in mannitol medium rep1GSE10330Transcriptome analysis of barley anthers: effect of mannitol treatment on microspore embryogenesis
9.699.0GSM282036Malting_steeped_Morex_rep2GSE11200Expression data from malting barley seeds
9.499.0GSM431547pathogen isolates: Mock - rep2GSE17238Response of barley roots during the host interaction with the plasmodiophorid virus vector Polymyxa graminis
9.299.0GSM431546pathogen isolates: Mock - rep1GSE17238Response of barley roots during the host interaction with the plasmodiophorid virus vector Polymyxa graminis
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.5501189Contig1385_atContig1385--5e-48At1g65960GAD2 (GLUTAMATE DECARBOXYLASE 2)C.G.S.X.
0.292e-89329Contig17092_atContig17092--9e-38At5g17330GADC.G.S.X.
0.305e-50198Contig1380_s_atContig1380--1e-17At1g65960GAD2 (GLUTAMATE DECARBOXYLASE 2)C.G.S.X.
0.313e-45182Contig1388_atContig1388--3e-30At3g17760GAD5 (glutamate decarboxylase 5)C.G.S.X.
0.013e-240Contig18108_atContig18108--2e+0At5g05990mitochondrial glycoprotein family protein / MAM33 family proteinC.G.S.X.
0.014e-136Contig12382_atContig12382--2e+1At5g60910AGL8 (agamous-like 8)C.G.S.X.
0.014e-136Contig18116_atContig18116--3e-2At1g51090heavy-metal-associated domain-containing proteinC.G.S.X.
0.014e-136Contig16300_s_atContig16300--1e+0At1g0721030S ribosomal protein S18 familyC.G.S.X.
0.014e-136Contig22226_atContig22226--6e-6At3g04670WRKY39C.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.404e-40167Arabidopsis thalianaAt2g02000814731GAD3 (glutamate decarboxylase 3)F:calmodulin binding;P:carboxylic acid metabolic process, glutamate metabolic process, glutamate decarboxylation to succinate;C:cellular_component unknown;BFPOMAV---C.G.S.X.
0.235e-34147Glycine maxPsAffx.CL202Contig1_atPsAffx.CL202Contig1--3e+0At2g02010GAD4 (glutamate decarboxylase 4)C.G.S.X.
0.6701806Oryza sativaOs03g0236200AK071556.1-Glutamate decarboxylase isozyme 3 (EC 4.1.1.15)4e-65At2g02010GAD4 (glutamate decarboxylase 4)C.G.S.X.
0.455e-68260Populus trichocarpaPtpAffx.208104.1.S1_atpmrna16098hypothetical protein-6e-125At5g17330GADC.G.S.X.
0.6001415Triticum aestivumTa.7341.1.S1_atCD892913hypothetical LOC542956-6e-33At1g65960GAD2 (GLUTAMATE DECARBOXYLASE 2)C.G.S.X.
0.458e-57220Vitis vinifera1607457_atCB341759hypothetical protein LOC100256481-2e-84At5g17330GADC.G.S.X.
0.6901746Zea maysZm.19066.1.S1_atCD975063--1e-37At2g02000GAD3 (glutamate decarboxylase 3)C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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