Gene omics information

Query gene ID	Contig13582_at
Gene name
Organism	Hordeum vulgare

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.63	80.3	Contig13582_at	Contig13582	-	-	2e-4	At3g03690	UNE7 (unfertilized embryo sac 7)	S.X.	H.G.	Please select
0.50	66.9	Contig412_x_at	Contig412	-	-	1e-3	At4g27230	HTA2 (histone H2A)	S.X.	H.G.	Please select
0.44	58.9	Contig12507_at	Contig12507	-	-	2e-4	At3g01930	nodulin family protein	S.X.	H.G.	Please select
0.29	35.5	Contig5865_at	Contig5865	-	-	2e+1	At5g04267	unknown protein	S.X.	H.G.	Please select
0.23	26.1	Contig25066_at	Contig25066	-	-	5e+0	At5g10730	binding / catalytic/ coenzyme binding	S.X.	H.G.	Please select
0.20	21.1	Contig7478_at	Contig7478	-	-	2e+0	At1g36622	unknown protein	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
12.0	99.3	GSM419977	Palea_Rep3	GSE16754	Comparative transcriptional profiling of organs of the barley spike
12.0	99.3	GSM440965	Control palea_Rep3	GSE17669	Gene expression in the barley spike during drought stress
10.1	99.1	GSM419975	Palea_Rep1	GSE16754	Comparative transcriptional profiling of organs of the barley spike
10.1	99.1	GSM440963	Control palea_Rep1	GSE17669	Gene expression in the barley spike during drought stress
9.7	99.0	GSM419973	Lemma_Rep2	GSE16754	Comparative transcriptional profiling of organs of the barley spike
9.7	99.0	GSM440958	Control lemma_Rep2	GSE17669	Gene expression in the barley spike during drought stress
8.9	98.9	GSM419972	Lemma_Rep1	GSE16754	Comparative transcriptional profiling of organs of the barley spike
8.9	98.9	GSM440957	Control lemma_Rep1	GSE17669	Gene expression in the barley spike during drought stress
8.7	98.9	GSM419976	Palea_Rep2	GSE16754	Comparative transcriptional profiling of organs of the barley spike
8.7	98.9	GSM440964	Control palea_Rep2	GSE17669	Gene expression in the barley spike during drought stress

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.14	3e-4	46	Contig14045_at	Contig14045	-	-	2e-18	At3g03690	UNE7 (unfertilized embryo sac 7)	C.G.	S.X.	Please select
0.04	3e-4	46	Contig9528_at	Contig9528	-	-	9e-4	At5g39990	glycosyltransferase family 14 protein / core-2/I-branching enzyme family protein	C.G.	S.X.	Please select
0.02	5e-3	42	Contig6164_at	Contig6164	-	-	5e-8	At5g53420	-	C.G.	S.X.	Please select
0.02	5e-3	42	Contig6164_s_at	Contig6164	-	-	5e-8	At5g53420	-	C.G.	S.X.	Please select
0.02	2e-2	40	Contig17684_at	Contig17684	-	-	1e-1	At4g16610	zinc finger (C2H2 type) family protein	C.G.	S.X.	Please select
0.02	8e-2	38	HX06H23r_at	HX06H23r	-	-	2e-2	At5g41430	zinc finger (C3HC4-type RING finger) family protein	C.G.	S.X.	Please select
0.01	8e-2	38	Contig13102_at	Contig13102	-	-	3e-3	At1g74750	pentatricopeptide (PPR) repeat-containing protein	C.G.	S.X.	Please select
0.01	8e-2	38	Contig5632_s_at	Contig5632	-	-	3e-3	At5g41430	zinc finger (C3HC4-type RING finger) family protein	C.G.	S.X.	Please select
0.01	8e-2	38	Contig5632_at	Contig5632	-	-	3e-3	At5g41430	zinc finger (C3HC4-type RING finger) family protein	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.06	2e-4	48	Arabidopsis thaliana	At3g03690	821186	UNE7 (unfertilized embryo sac 7)	F:transferase activity, transferring glycosyl groups, acetylglucosaminyltransferase activity;P:carbohydrate biosynthetic process, double fertilization forming a zygote and endosperm, pollen tube development;C:endomembrane system, membrane;MPBVO	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.04	4e-3	44	Glycine max	GmaAffx.68089.1.S1_at	BE554824	-	-	2e-25	At5g15050	glycosyltransferase family 14 protein / core-2/I-branching enzyme family protein	C.G.	S.X.	Please select
0.58	2e-122	440	Oryza sativa	Os10g0437000	CB657474	-	Glycosyl transferase, family 14 protein	1e-5	At3g03690	UNE7 (unfertilized embryo sac 7)	C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.02	1e-2	42	Populus trichocarpa	PtpAffx.207442.1.S1_at	pmrna14781	single myb histone	-	5e-10	At3g49850	TRB3 (TELOMERE REPEAT BINDING FACTOR 3)	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.08	4e-2	40	Triticum aestivum	Ta.12174.1.A1_at	CD452810	-	-	1e-14	At3g03690	UNE7 (unfertilized embryo sac 7)	C.G.	S.X.	Please select
0.04	5e-2	38	Vitis vinifera	1622113_at	CF209612	hypothetical protein LOC100245719	-	4e-61	At5g15050	glycosyltransferase family 14 protein / core-2/I-branching enzyme family protein	C.G.	S.X.	Please select
0.34	8e-85	313	Zea mays	Zm.19208.1.A1_at	CO525556	-	-	1e+0	At1g04930	hydroxyproline-rich glycoprotein family protein	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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