Gene omics information

Query gene ID Contig1356_s_at
Gene name
Organism Hordeum vulgare


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.7790.8Contig1356_s_atContig1356--4e+0At4g02450glycine-rich proteinS.X.H.G.
0.6077.3Contig6618_atContig6618--4e-1At5g51180unknown proteinS.X.H.G.
0.6077.3Contig4157_atContig4157--1e-25At1g60780HAP13 (HAPLESS 13)S.X.H.G.
0.5066.9Contig1470_s_atContig1470--6e-3At4g00610DNA-binding storekeeper protein-relatedS.X.H.G.
0.5066.9Contig11557_atContig11557--2e+0At5g27860unknown proteinS.X.H.G.
0.3545.1Contig9016_atContig9016--9e-7At5g22070unknown proteinS.X.H.G.
Click here to hide the above table.


Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
41.099.9GSM238422Endosperm 24 h; Seed germination; Rep 1GSE9365Expression data from barley maturing and germinating grains
34.799.9GSM282034Malting_steeped_Morex_rep1GSE11200Expression data from malting barley seeds
32.799.9GSM238421Endosperm 0 h; Seed germination Rep 2GSE9365Expression data from barley maturing and germinating grains
29.499.9GSM238423Endosperm 24 h; Seed germination; Rep 2GSE9365Expression data from barley maturing and germinating grains
28.699.8GSM282025Control_dryseed_Morex_rep1GSE11200Expression data from malting barley seeds
23.799.8GSM282036Malting_steeped_Morex_rep2GSE11200Expression data from malting barley seeds
22.899.8GSM238420Endosperm 0 h; Seed germination; Rep 1GSE9365Expression data from barley maturing and germinating grains
22.799.8GSM238431Embryo 25DAF; Seed development; Rep 2GSE9365Expression data from barley maturing and germinating grains
21.099.7GSM282041Control_dryseed_Morex_rep2GSE11200Expression data from malting barley seeds
15.899.6GSM238425Endosperm 48 h; Seed germination; Rep 2GSE9365Expression data from barley maturing and germinating grains
Click here to hide the above table.


Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.420734Contig1357_atContig1357--3e-15At1g79870oxidoreductase family proteinC.G.S.X.
0.065e-444Contig16574_atContig16574--1e+0At1g26940peptidyl-prolyl cis-trans isomerase cyclophilin-type family proteinC.G.S.X.
0.023e-238Contig8572_s_atContig8572--1e-1At1g47970unknown proteinC.G.S.X.
0.025e-134Contig816_s_atContig816--6e-4At1g77120ADH1 (ALCOHOL DEHYDROGENASE 1)C.G.S.X.
0.025e-134Contig903_atContig903--5e-11At1g77120ADH1 (ALCOHOL DEHYDROGENASE 1)C.G.S.X.
0.055e-134HA10H23u_x_atHA10H23u--6e-4At5g14780FDH (FORMATE DEHYDROGENASE)C.G.S.X.
0.035e-134Contig7507_atContig7507--4e-1At5g19810proline-rich extensin-like family proteinC.G.S.X.
0.015e-134Contig4278_atContig4278--7e-2At1g76550pyrophosphate--fructose-6-phosphate 1-phosphotransferase alpha subunit, putative / pyrophosphate-dependent 6-phosphofructose-1-kinase, putativeC.G.S.X.
0.025e-134Contig1459_atContig1459--1e-14At5g14780FDH (FORMATE DEHYDROGENASE)C.G.S.X.
Click here to hide the above table.



Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.034e+032Arabidopsis thalianaAt4g02450828006glycine-rich proteinF:molecular_function unknown;P:unknown;C:plasma membrane;BMOPFVA---C.G.S.X.
0.034e-136Glycine maxGmaAffx.83377.1.S1_atBM885268--5e-3At1g32280protease inhibitor/seed storage/lipid transfer protein (LTP) family proteinC.G.S.X.
0.158e-34145Oryza sativaOsAffx.23220.1.S1_x_at---0C.G.S.X.
0.051e+034Populus trichocarpaPtpAffx.219633.1.S1_atpmrna35595hypothetical protein-5e+0At1g44085glycine-rich proteinC.G.S.X.
0.354e-105381Triticum aestivumTa.7012.2.S1_atCA708999--3e-15At1g79870oxidoreductase family proteinC.G.S.X.
0.031e+032Vitis vinifera1610629_atCB345477--4e+0At5g06030self-incompatibility protein-relatedC.G.S.X.
0.402e-28125Zea maysZmAffx.1073.1.A1_atAI947671glyoxylate reductase-3e+0At5g60964-C.G.S.X.
Click here to hide the above table.


Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
Click here to hide the above table.


Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
Click here to hide the above table.



Back to the CoP portal site

Back to the KAGIANA project homepage