Gene omics information

Query gene ID Contig1323_s_at
Gene name
Organism Hordeum vulgare


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.8494.3Contig1323_s_atContig1323--1e-72At3g56800CAM3 (CALMODULIN 3)S.X.H.G.
0.4661.0Contig4290_atContig4290--4e-15At4g32390phosphate translocator-relatedS.X.H.G.
0.4458.9Contig4806_atContig4806--4e-1At4g08685SAH7S.X.H.G.
0.4053.1EBem04_SQ003_G17_s_atEBem04_SQ003_G17--3e+0At3g48070protein binding / zinc ion bindingS.X.H.G.
0.3950.5Contig10415_atContig10415--2e+0At5g44570unknown proteinS.X.H.G.
0.3443.6Contig2811_atContig2811--3e-1At1g21550calcium-binding protein, putativeS.X.H.G.
0.3443.6Contig9136_atContig9136--1e-5At3g51140-S.X.H.G.
0.3443.6Contig6995_atContig6995--2e-8At5g57270unknown proteinS.X.H.G.
0.3240.3Contig8177_atContig8177--7e-3At2g18400ribosomal protein L6 family proteinS.X.H.G.
0.3037.0Contig13060_atContig13060--5e-10At4g10060catalytic/ glucosylceramidaseS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
23.699.8GSM261046after 3 days in mannitol medium rep2GSE10330Transcriptome analysis of barley anthers: effect of mannitol treatment on microspore embryogenesis
19.899.7GSM261045after 3 days in mannitol medium rep1GSE10330Transcriptome analysis of barley anthers: effect of mannitol treatment on microspore embryogenesis
17.399.6GSM261047after 3 days in mannitol medium rep3GSE10330Transcriptome analysis of barley anthers: effect of mannitol treatment on microspore embryogenesis
5.397.4GSM282035Malting_day4_Morex_rep1GSE11200Expression data from malting barley seeds
4.997.1GSM282032Malting_day1_Morex_rep1GSE11200Expression data from malting barley seeds
4.796.9GSM282039Malting_day4_Morex_rep2GSE11200Expression data from malting barley seeds
3.795.5GSM238414Endosperm 8DAF; Seed development; Rep 1GSE9365Expression data from barley maturing and germinating grains
3.595.1GSM282028Malting_day1_Merit_rep1GSE11200Expression data from malting barley seeds
3.494.8GSM282037Malting_day1_Morex_rep2GSE11200Expression data from malting barley seeds
3.494.8GSM282022Malting_day4_Merit_rep4GSE11200Expression data from malting barley seeds
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.9201406Contig1336_atContig1336--6e-68At3g56800CAM3 (CALMODULIN 3)C.G.S.X.
0.610956Contig1339_atContig1339--4e-66At3g56800CAM3 (CALMODULIN 3)C.G.S.X.
0.540650Contig1328_s_atContig1328--3e-82At5g37780CAM1 (CALMODULIN 1)C.G.S.X.
0.494e-169593Contig1340_atContig1340--2e-55At5g21274CAM6 (CALMODULIN 6)C.G.S.X.
0.464e-132470Contig1321_atContig1321--3e-88At5g37780CAM1 (CALMODULIN 1)C.G.S.X.
0.449e-127452Contig1327_atContig1327--1e-94At3g43810CAM7 (CALMODULIN 7)C.G.S.X.
0.462e-97355Contig1338_s_atContig1338--2e-73At3g43810CAM7 (CALMODULIN 7)C.G.S.X.
0.462e-97355Contig1338_atContig1338--2e-73At3g43810CAM7 (CALMODULIN 7)C.G.S.X.
0.466e-91333Contig1330_atContig1330--2e-95At3g56800CAM3 (CALMODULIN 3)C.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.591e-72274Arabidopsis thalianaAt3g56800824847CAM3 (CALMODULIN 3)encodes a calmodulin---C.G.S.X.
0.562e-96353Glycine maxGmaAffx.91756.1.S1_atCF807481Calmodulin (SCaM-2)-2e-85At3g43810CAM7 (CALMODULIN 7)C.G.S.X.
0.567e-100365Oryza sativaOs07g0687200AF441191.1-Calmodulin (CaM) (BC329)2e-108At5g37780CAM1 (CALMODULIN 1)C.G.S.X.
0.496e-75282Populus trichocarpaPtp.1551.2.S1_atBU882242hypothetical protein-6e-98At5g21274CAM6 (CALMODULIN 6)C.G.S.X.
0.720872Triticum aestivumTa.11837.1.S1_atBJ286922--7e-68At3g43810CAM7 (CALMODULIN 7)C.G.S.X.
0.383e-82303Vitis vinifera1610944_atBQ794641hypothetical protein LOC100261610-1e-103At5g21274CAM6 (CALMODULIN 6)C.G.S.X.
0.472e-143508Zea maysZm.352.1.S1_atAF031482.1calmodulin-5e-90At3g56800CAM3 (CALMODULIN 3)C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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