Gene omics information

Query gene ID Contig13239_at
Gene name
Organism Hordeum vulgare


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.5066.9Contig13239_atContig13239--2e+0At1g58460unknown proteinS.X.H.G.
0.1919.6Contig14890_atContig14890--5e-2At2g18320-S.X.H.G.
0.1818.2HVSMEb0006K18r2_atHVSMEb0006K18r2--7e-2At5g13220JAZ10 (JASMONATE-ZIM-DOMAIN PROTEIN 10)S.X.H.G.
0.043.4Contig12897_atContig12897--1e-3At4g28600NPGR2 (no pollen germination related 2)S.X.H.G.
0.043.4EBem06_SQ003_J07_atEBem06_SQ003_J07--3e+0At2g42530COR15B (COLD REGULATED 15B)S.X.H.G.
0.043.4Contig22044_atContig22044--2e-39At2g36170ubiquitin extension protein 2 (UBQ2) / 60S ribosomal protein L40 (RPL40A)S.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
26.299.8GSM419980Awn_Rep3GSE16754Comparative transcriptional profiling of organs of the barley spike
26.299.8GSM440971Control awn_Rep3GSE17669Gene expression in the barley spike during drought stress
20.499.7GSM419979Awn_Rep2GSE16754Comparative transcriptional profiling of organs of the barley spike
20.499.7GSM440970Control awn_Rep2GSE17669Gene expression in the barley spike during drought stress
18.699.7GSM261027ABA-Late-rep1GSE10328ABA experiment
14.099.5GSM261029ABA-Late-rep3GSE10328ABA experiment
11.299.2GSM261028ABA-Late-rep2GSE10328ABA experiment
11.199.2GSM419973Lemma_Rep2GSE16754Comparative transcriptional profiling of organs of the barley spike
11.199.2GSM440958Control lemma_Rep2GSE17669Gene expression in the barley spike during drought stress
9.599.0GSM419976Palea_Rep2GSE16754Comparative transcriptional profiling of organs of the barley spike
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.036e-238Contig10245_atContig10245--2e+0At1g34000OHP2 (ONE-HELIX PROTEIN 2)C.G.S.X.
0.026e-238Contig6856_atContig6856--2e+0At5g511104-alpha-hydroxytetrahydrobiopterin dehydrataseC.G.S.X.
0.012e-136Contig9814_atContig9814--8e-1At4g19270unknown proteinC.G.S.X.
0.032e-136S0001000057A05F1_atS0001000057A05F1--9e+0At5g47830unknown proteinC.G.S.X.
0.032e-136Contig25867_atContig25867--5e-2At2g21490LEA (DEHYDRIN LEA)C.G.S.X.
0.032e-136Contig24136_atContig24136--2e-39At2g47110UBQ6C.G.S.X.
0.032e-136Contig20892_atContig20892--2e+0At3g29300unknown proteinC.G.S.X.
0.012e-136Contig12448_atContig12448--5e-21At1g31930XLG3 (extra-large GTP-binding protein 3)C.G.S.X.
0.022e-136Contig11653_s_atContig11653--8e+0At4g40011unknown proteinC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.032e+034Arabidopsis thalianaAt1g58460842215unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P---C.G.S.X.
0.036e-136Glycine maxPsAffx.CL365Contig1_s_atPsAffx.CL365Contig1--4e+0At5g23840MD-2-related lipid recognition domain-containing protein / ML domain-containing proteinC.G.S.X.
0.181e-21105Oryza sativaOs01g0110200AK109646.1-Conserved hypothetical protein2e+0At1g73165CLE1 (CLAVATA3/ESR-RELATED 1)C.G.S.X.
0.033e+034Populus trichocarpaPtpAffx.133537.1.A1_atCV271849--3e-16At5g08415lipoic acid synthase family proteinC.G.S.X.
0.414e-88325Triticum aestivumTa.13161.1.S1_atCK212639--2e+0At1g58460unknown proteinC.G.S.X.
0.025e-134Vitis vinifera1607977_atCF213224hypothetical protein LOC100259371-1e+0At1g49200zinc finger (C3HC4-type RING finger) family proteinC.G.S.X.
0.048e-134Zea maysZm.4987.1.A1_atBM380442hypothetical protein LOC100194192-1e+0At5g24830pentatricopeptide (PPR) repeat-containing proteinC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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