Gene omics information

Query gene ID Contig13233_at
Gene name
Organism Hordeum vulgare


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.5066.9Contig13233_atContig13233--5e-1At2g42260UVI4 (UV-B-INSENSITIVE 4)S.X.H.G.
0.6077.3Contig9794_atContig9794--4e-1At5g61030GR-RBP3 (glycine-rich RNA-binding protein 3)S.X.H.G.
0.5066.9Contig9793_atContig9793--8e-26At1g61140EDA16 (embryo sac development arrest 16)S.X.H.G.
0.3849.5Contig7031_atContig7031--7e-1At1g58100TCP family transcription factor, putativeS.X.H.G.
0.3342.6Contig19644_atContig19644--1e+0At1g79790haloacid dehalogenase-like hydrolase family proteinS.X.H.G.
0.1716.9HVSMEf0009N22f_atHVSMEf0009N22f--3e-2At4g29170ATMND1S.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
10.999.2GSM261041Dicktoo-deacclimation-rep3GSE10329Low temperature stress in cv. Dicktoo
10.599.2GSM261040Dicktoo-deacclimation-rep2GSE10329Low temperature stress in cv. Dicktoo
10.099.1GSM261032Dicktoo control-rep3GSE10329Low temperature stress in cv. Dicktoo
9.499.0GSM261030Dicktoo-control-rep1GSE10329Low temperature stress in cv. Dicktoo
8.598.8GSM261022ABA-Control-rep2GSE10328ABA experiment
8.198.7GSM160744drought control rep2GSE6990Barley drought stress
7.898.6GSM261039Dicktoo-deacclimation-rep1GSE10329Low temperature stress in cv. Dicktoo
7.098.4GSM372990genotype: 11542 - pathogen isolates: 5874 - time: 32 - rep2GSE14930Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene
6.198.0GSM372997genotype: 11542 - pathogen isolates: K1 - time: 8 - rep3GSE14930Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene
5.297.4GSM372989genotype: 11542 - pathogen isolates: 5874 - time: 32 - rep1GSE14930Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.293e-59228Contig18751_atContig18751--2e+0At2g18721unknown proteinC.G.S.X.
0.353e-50198Contig19287_atContig19287--2e+0At4g27657unknown proteinC.G.S.X.
0.253e-50198Contig16035_atContig16035--6e+0At3g47590esterase/lipase/thioesterase family proteinC.G.S.X.
0.264e-46184HF21E11r_atHF21E11r--1e+0At5g48657defense protein-relatedC.G.S.X.
0.359e-41167HM02P02u_atHM02P02u--4e+0At5g61640PMSR1 (PEPTIDEMETHIONINE SULFOXIDE REDUCTASE 1)C.G.S.X.
0.222e-32139Contig20711_atContig20711--1e+0At3g50337unknown proteinC.G.S.X.
0.227e-2097Contig26145_atContig26145--4e-1At1g65170ubiquitin carboxyl-terminal hydrolase family proteinC.G.S.X.
0.342e-1789HVSMEc0014N06r2_atHVSMEc0014N06r2--1e+0At5g44140ATPHB7 (PROHIBITIN 7)C.G.S.X.
0.141e-1583Contig10653_atContig10653--2e+0At5g57660zinc finger (B-box type) family proteinC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.025e-136Arabidopsis thalianaAt2g42260818827UVI4 (UV-B-INSENSITIVE 4)Encodes a novel plant-specific protein of unknown function. The UVI4 gene is expressed mainly in actively dividing cells. The hypocotyl cells in mutant seedlings undergo one extra round of endoreduplication. The uvi4 mutation also promoted the progression of endo-reduplication during leaf development.---C.G.S.X.
0.031e-242Glycine maxGmaAffx.12286.2.S1_atBM108265--1e-11At5g38510rhomboid family proteinC.G.S.X.
0.021e-242Oryza sativaOs11g0479000AK107976.1-Hypothetical protein4e-1At5g19875unknown proteinC.G.S.X.
0.037e-136Populus trichocarpaPtpAffx.15197.1.S1_atCX181414hypothetical protein-1e-3At4g25225unknown proteinC.G.S.X.
0.071e-448Triticum aestivumTaAffx.119446.1.A1_atBJ272095--2e-1At3g44570unknown proteinC.G.S.X.
0.046e-444Vitis vinifera1609955_atCA810705hypothetical protein LOC100267740-8e-2At1g73790unknown proteinC.G.S.X.
0.033e-342Zea maysZm.12295.2.S1_a_atCD441109stress responsive protein-2e-2At2g39050hydroxyproline-rich glycoprotein family proteinC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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