CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Contig13143_s_at

Gene name

Organism Hordeum vulgare

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.67 84.7 Contig13143_s_at Contig13143 - - 5e+0 At5g38565 - S.X. H.G.
0.61 78.7 Contig17594_at Contig17594 - - 2e+0 At4g11300 unknown protein S.X. H.G.
0.53 69.7 Contig13743_at Contig13743 - - 1e+0 At3g61172 LCR8 (Low-molecular-weight cysteine-rich 8) S.X. H.G.
0.50 66.9 Contig4941_s_at Contig4941 - - 3e-2 At4g17190 FPS2 (FARNESYL DIPHOSPHATE SYNTHASE 2) S.X. H.G.
0.44 58.9 Contig26418_at Contig26418 - - 2e+0 At4g32260 ATP synthase family S.X. H.G.
0.29 35.5 Contig11945_s_at Contig11945 - - 1e+0 At1g13450 DNA binding protein GT-1 S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
10.3 99.1 GSM372981 genotype: 11542 - pathogen isolates: 5874 - time: 16 - rep2 GSE14930 Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene
10.1 99.1 GSM372984 genotype: 11542 - pathogen isolates: 5874 - time: 20 - rep2 GSE14930 Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene
6.7 98.3 GSM372987 genotype: 11542 - pathogen isolates: 5874 - time: 24 - rep2 GSE14930 Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene
6.3 98.1 GSM372985 genotype: 11542 - pathogen isolates: 5874 - time: 20 - rep3 GSE14930 Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene
5.3 97.4 GSM372990 genotype: 11542 - pathogen isolates: 5874 - time: 32 - rep2 GSE14930 Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene
5.3 97.4 GSM372982 genotype: 11542 - pathogen isolates: 5874 - time: 16 - rep3 GSE14930 Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene
5.3 97.4 GSM382235 Root_Control1 GSE15295 Mercury toxicity in barley roots
5.1 97.3 GSM372945 genotype: Mla6 - pathogen isolates: 5874 - time: 16 - rep2 GSE14930 Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene
4.9 97.1 GSM372988 genotype: 11542 - pathogen isolates: 5874 - time: 24 - rep3 GSE14930 Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene
4.5 96.7 GSM372964 genotype: Mla6 - pathogen isolates: K1 - time: 16 - rep3 GSE14930 Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.91 0 837 Contig13143_at Contig13143 - - 5e+0 At5g38565 - C.G. S.X.
0.13 8e-28 123 Contig12043_at Contig12043 - - 2e-4 At3g18170 transferase, transferring glycosyl groups C.G. S.X.
0.17 1e-11 69 Contig4687_at Contig4687 - - 6e-10 At3g18170 transferase, transferring glycosyl groups C.G. S.X.
0.19 2e-10 65 Contig4689_at Contig4689 - - 1e+0 At2g12405 unknown protein C.G. S.X.
0.19 6e-7 54 Contig14020_at Contig14020 - - 4e-7 At3g18170 transferase, transferring glycosyl groups C.G. S.X.
0.02 4e-2 38 Contig4112_at Contig4112 - - 6e-1 At2g30560 glycine-rich protein C.G. S.X.
0.02 1e-1 36 Contig16505_at Contig16505 - - 8e-7 At2g19430 transducin family protein / WD-40 repeat family protein C.G. S.X.
0.03 1e-1 36 rbags24o03_at rbags24o03 - - 3e-1 At5g58784 dehydrodolichyl diphosphate synthase C.G. S.X.
0.02 1e-1 36 Contig13821_at Contig13821 - - 5e-4 At2g48010 RKF3 (RECEPTOR-LIKE KINASE IN IN FLOWERS 3) C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.02 5e+0 32 Arabidopsis thaliana At5g38565 833845 - F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P - - - C.G. S.X.
0.03 2e+0 34 Glycine max PsAffx.CL1690Contig1_at PsAffx.CL1690Contig1 - - 3e+0 At4g24026 unknown protein C.G. S.X.
0.16 7e-53 208 Oryza sativa Os02g0135500 AK119583.1 - Protein of unknown function DUF563 family protein 3e-1 At3g60270 uclacyanin, putative C.G. S.X.
0.03 7e+0 32 Populus trichocarpa PtpAffx.99131.1.S1_at BI130580 hypothetical protein - 1e+0 At1g31510 F-box family protein-related C.G. S.X.
0.53 1e-133 476 Triticum aestivum Ta.9427.2.S1_at CA659370 - - 3e-7 At3g18170 transferase, transferring glycosyl groups C.G. S.X.
0.03 9e-2 36 Vitis vinifera 1622695_at CF414053 hypothetical protein LOC100267469 - 2e-2 At3g63230 unknown protein C.G. S.X.
0.38 6e-53 206 Zea mays Zm.11988.1.A1_x_at BM382435 - - 1e+1 At2g30840 2-oxoglutarate-dependent dioxygenase, putative C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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