Gene omics information

Query gene ID Contig13100_at
Gene name
Organism Hordeum vulgare


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.6480.9Contig13100_atContig13100--8e-33At1g51570C2 domain-containing proteinS.X.H.G.
0.5975.8Contig5793_atContig5793--1e-1At5g23950C2 domain-containing proteinS.X.H.G.
0.5874.9Contig25005_atContig25005--4e+0At2g28480RNA bindingS.X.H.G.
0.5874.9Contig11611_atContig11611--4e-1At5g65060MAF3 (MADS AFFECTING FLOWERING 3)S.X.H.G.
0.5874.9Contig11670_atContig11670--4e-2At4g35430unknown proteinS.X.H.G.
0.5674.3Contig6842_atContig6842--2e-4At1g78980SRF5 (STRUBBELIG-RECEPTOR FAMILY 5)S.X.H.G.
0.5674.3Contig11291_atContig11291--1e-4At5g47320RPS19 (RIBOSOMAL PROTEIN S19)S.X.H.G.
0.5572.0Contig4883_atContig4883--2e-4At4g38220aminoacylase, putative / N-acyl-L-amino-acid amidohydrolase, putativeS.X.H.G.
0.5268.3EBpi01_SQ005_I12_x_atEBpi01_SQ005_I12--1e+0At3g05300cytidine/deoxycytidylate deaminase family proteinS.X.H.G.
0.5167.5Contig11540_atContig11540--3e+0At3g44190pyridine nucleotide-disulphide oxidoreductase family proteinS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
24.899.8GSM238417Endosperm 16DAF; Seed development; Rep 2GSE9365Expression data from barley maturing and germinating grains
24.299.8GSM238428Embryo 16DAF; Seed development; Rep 1GSE9365Expression data from barley maturing and germinating grains
19.799.7GSM238414Endosperm 8DAF; Seed development; Rep 1GSE9365Expression data from barley maturing and germinating grains
17.999.7GSM238416Endosperm 16DAF; Seed development; Rep 1GSE9365Expression data from barley maturing and germinating grains
15.499.6GSM238418Endosperm 25DAF; Seed development; Rep 1GSE9365Expression data from barley maturing and germinating grains
14.499.5GSM238429Embryo 16DAF; Seed development; Rep 2GSE9365Expression data from barley maturing and germinating grains
9.399.0GSM419982Seed_Rep2GSE16754Comparative transcriptional profiling of organs of the barley spike
9.399.0GSM440976Control seed_Rep2GSE17669Gene expression in the barley spike during drought stress
8.998.9GSM146373Golden Promise shoot Salt, biological rep 2GSE6325Array-based genotyping and expression analysis of barley cv. Maythorpe and Golden Promise
8.298.7GSM146379Maythorpe shoot Salt, biological rep 2GSE6325Array-based genotyping and expression analysis of barley cv. Maythorpe and Golden Promise
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.098e-1063Contig7512_atContig7512--3e-7At5g12970C2 domain-containing proteinC.G.S.X.
0.098e-1063Contig7512_s_atContig7512--3e-7At5g12970C2 domain-containing proteinC.G.S.X.
0.052e-446Contig11654_atContig11654--8e-7At1g22610C2 domain-containing proteinC.G.S.X.
0.147e-444Contig8345_atContig8345--5e-12At1g51570C2 domain-containing proteinC.G.S.X.
0.027e-134Contig20724_atContig20724--1e+0At1g54830NF-YC3 (NUCLEAR FACTOR Y, SUBUNIT C3)C.G.S.X.
0.027e-134Contig1876_s_atContig1876--1e-1At3g49120PRXCB (PEROXIDASE CB)C.G.S.X.
0.027e-134Contig1854_atContig1854--2e-1At3g49120PRXCB (PEROXIDASE CB)C.G.S.X.
0.033e+032Contig13485_s_atContig13485--4e+0At5g35631unknown proteinC.G.S.X.
0.023e+032Contig13484_atContig13484--7e+0At5g35631unknown proteinC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.168e-33141Arabidopsis thalianaAt1g51570841582C2 domain-containing proteinF:unknown;P:tryptophan biosynthetic process;C:endoplasmic reticulum, cell wall;MPOF---C.G.S.X.
0.347e-25115Glycine maxGmaAffx.79184.1.S1_atBQ473675--6e-84At3g57880C2 domain-containing proteinC.G.S.X.
0.216e-137488Oryza sativaOs05g0370600AK102476.1-C2 domain containing protein2e-21At3g57880C2 domain-containing proteinC.G.S.X.
0.214e-1789Populus trichocarpaPtp.2011.1.S1_atCF230864hypothetical protein-2e-21At1g51570C2 domain-containing proteinC.G.S.X.
0.660971Triticum aestivumTa.6672.1.S1_a_atBJ309634--3e-27At1g51570C2 domain-containing proteinC.G.S.X.
0.032e+032Vitis vinifera1608821_atCF373423hypothetical protein LOC100259588-1e+0At4g23670major latex protein-related / MLP-relatedC.G.S.X.
0.473e-83307Zea maysZm.4072.1.S1_atAI834416phosphoribosylanthranilate transferase-2e-6At5g12970C2 domain-containing proteinC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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