Gene omics information

Query gene ID Contig1298_at
Gene name
Organism Hordeum vulgare


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.6784.7Contig1298_atContig1298--6e-51At2g36530LOS2S.X.H.G.
0.5369.7Contig12989_x_atContig12989--5e-1At5g55970zinc finger (C3HC4-type RING finger) family proteinS.X.H.G.
0.5066.9Contig6986_atContig6986--1e-3At5g01820ATSR1 (ARABIDOPSIS THALIANA SERINE/THREONINE PROTEIN KINASE 1)S.X.H.G.
0.3138.6Contig6987_atContig6987--6e-17At1g46768RAP2.1 (related to AP2 1)S.X.H.G.
0.1716.9Contig13445_atContig13445HvEMF2b protein-2e-8At5g51230EMF2 (EMBRYONIC FLOWER 2)S.X.H.G.
0.032.6Contig9040_atContig9040--3e-3At5g07600oleosin / glycine-rich proteinS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
92.4100.0GSM261045after 3 days in mannitol medium rep1GSE10330Transcriptome analysis of barley anthers: effect of mannitol treatment on microspore embryogenesis
68.9100.0GSM261047after 3 days in mannitol medium rep3GSE10330Transcriptome analysis of barley anthers: effect of mannitol treatment on microspore embryogenesis
65.6100.0GSM261046after 3 days in mannitol medium rep2GSE10330Transcriptome analysis of barley anthers: effect of mannitol treatment on microspore embryogenesis
19.899.7GSM238423Endosperm 24 h; Seed germination; Rep 2GSE9365Expression data from barley maturing and germinating grains
18.599.7GSM238425Endosperm 48 h; Seed germination; Rep 2GSE9365Expression data from barley maturing and germinating grains
17.899.7GSM238422Endosperm 24 h; Seed germination; Rep 1GSE9365Expression data from barley maturing and germinating grains
11.399.3GSM215731gibberellin treatment rep2GSE8712The effects of Yariv-reagent on barley aleurone GA signaling
9.299.0GSM238421Endosperm 0 h; Seed germination Rep 2GSE9365Expression data from barley maturing and germinating grains
8.698.8GSM215730Control (DMSO) treatment rep2GSE8712The effects of Yariv-reagent on barley aleurone GA signaling
7.498.5GSM71156Morex stress and unstress replicate 3GSE3170 Barley single feature polymorphisms and drought stress gene expression
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.523e-113408Contig1300_x_atContig1300--2e-168At2g36530LOS2C.G.S.X.
0.492e-98359Contig1294_atContig1294--2e-153At2g36530LOS2C.G.S.X.
0.082e-1273HD07C21r_x_atHD07C21r--4e-6At2g36530LOS2C.G.S.X.
0.082e-1273HD07C21r_atHD07C21r--4e-6At2g36530LOS2C.G.S.X.
0.061e-1067Contig1289_atContig1289--1e-4At2g36530LOS2C.G.S.X.
0.065e-1065Contig17025_atContig17025--6e-27At1g74030enolase, putativeC.G.S.X.
0.061e-757HU08B06u_x_atHU08B06u--1e-21At2g36530LOS2C.G.S.X.
0.021e-138Contig21194_s_atContig21194--5e+0At2g20940unknown proteinC.G.S.X.
0.021e-138Contig21194_atContig21194--5e+0At2g20940unknown proteinC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.506e-51202Arabidopsis thalianaAt2g36530818226LOS2Involved in light-dependent cold tolerance and encodes an enolase. Protein is tyrosine-phosphorylated and its phosphorylation state is modulated in response to ABA in Arabidopsis thaliana seeds.---C.G.S.X.
0.296e-21103Glycine maxGma.17597.1.S1_atAW349391enolase-9e-109At2g36530LOS2C.G.S.X.
0.6701007Oryza sativaOs06g0136600AK069316.1-Enolase 1 (EC 4.2.1.11) (2-phosphoglyceratedehydratase 1) (2-phospho- D-glycerate hydro-lyase 1)9e-47At2g36530LOS2C.G.S.X.
0.367e-36153Populus trichocarpaPtp.6097.1.S1_x_atCV236222hypothetical protein-5e-85At2g36530LOS2C.G.S.X.
0.470712Triticum aestivumTa.25964.1.A1_atCD454849--3e-7At2g36530LOS2C.G.S.X.
0.254e-49194Vitis vinifera1620865_atCB917214hypothetical protein LOC100254950-5e-73At2g36530LOS2C.G.S.X.
0.6401128Zea maysZm.14043.1.S1_a_atAY103975.1enolase1-3e-81At2g36530LOS2C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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