Gene omics information

Query gene ID Contig12913_s_at
Gene name
Organism Hordeum vulgare


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.5674.3Contig12913_s_atContig12913--6e+0At5g01840OFP1 (OVATE FAMILY PROTEIN 1)S.X.H.G.
0.4863.2Contig12916_s_atContig12916--1e-2At3g11180oxidoreductase, 2OG-Fe(II) oxygenase family proteinS.X.H.G.
0.3138.6HVSMEc0005F13r2_atHVSMEc0005F13r2--1e+0At4g00950MEE47 (maternal effect embryo arrest 47)S.X.H.G.
0.3037.0Contig3054_atContig3054--3e-5At4g28050TET7 (TETRASPANIN7)S.X.H.G.
0.2935.5HT08H03u_s_atHT08H03u--1e-2At5g12140ATCYS1 (A. thaliana cystatin-1)S.X.H.G.
0.2935.5HV_CEb0010F15r2_atHV_CEb0010F15r2--5e-6At2g45500ATP binding / nucleoside-triphosphatase/ nucleotide bindingS.X.H.G.
0.2427.2Contig14738_atContig14738--6e-1At2g18110elongation factor 1-beta, putative / EF-1-beta, putativeS.X.H.G.
0.1919.6Contig7608_atContig7608--2e-18At2g31660SAD2 (SUPER SENSITIVE TO ABA AND DROUGHT2)S.X.H.G.
0.1716.9Contig21107_atContig21107--1e+0At5g54970unknown proteinS.X.H.G.
0.1311.6Contig13712_atContig13712--2e+0At4g08869-S.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
22.899.8GSM431546pathogen isolates: Mock - rep1GSE17238Response of barley roots during the host interaction with the plasmodiophorid virus vector Polymyxa graminis
20.299.7GSM431549pathogen isolates: Polymyxa graminis - rep1GSE17238Response of barley roots during the host interaction with the plasmodiophorid virus vector Polymyxa graminis
17.599.6GSM431550pathogen isolates: Polymyxa graminis - rep2GSE17238Response of barley roots during the host interaction with the plasmodiophorid virus vector Polymyxa graminis
17.499.6GSM431551pathogen isolates: Polymyxa graminis - rep3GSE17238Response of barley roots during the host interaction with the plasmodiophorid virus vector Polymyxa graminis
17.399.6GSM431548pathogen isolates: Mock - rep3GSE17238Response of barley roots during the host interaction with the plasmodiophorid virus vector Polymyxa graminis
16.099.6GSM431573pathogen isolates: Polymyxa betae - rep3GSE17240Response of barley roots during the non-host interaction with the plasmodiophorid virus vector Polymyxa betae
15.599.6GSM431569pathogen isolates: Mock inoculated control - rep2GSE17240Response of barley roots during the non-host interaction with the plasmodiophorid virus vector Polymyxa betae
13.699.5GSM431547pathogen isolates: Mock - rep2GSE17238Response of barley roots during the host interaction with the plasmodiophorid virus vector Polymyxa graminis
13.099.4GSM431572pathogen isolates: Polymyxa betae - rep2GSE17240Response of barley roots during the non-host interaction with the plasmodiophorid virus vector Polymyxa betae
11.099.2GSM431571pathogen isolates: Polymyxa betae - rep1GSE17240Response of barley roots during the non-host interaction with the plasmodiophorid virus vector Polymyxa betae
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.9801255Contig12913_atContig12913--6e+0At5g01840OFP1 (OVATE FAMILY PROTEIN 1)C.G.S.X.
0.023e-342Contig5707_atContig5707--2e-1At2g35680dual specificity protein phosphatase family proteinC.G.S.X.
0.031e-240Contig20848_atContig20848--1e-3At2g35960NHL12C.G.S.X.
0.035e-238Contig10380_x_atContig10380--4e-1At1g17880nascent polypeptide-associated complex (NAC) domain-containing protein / BTF3b-like transcription factor, putativeC.G.S.X.
0.035e-238Contig10380_atContig10380--4e-1At1g17880nascent polypeptide-associated complex (NAC) domain-containing protein / BTF3b-like transcription factor, putativeC.G.S.X.
0.022e-136Contig2503_atContig2503--9e-25At4g14550IAA14 (INDOLE-3-ACETIC ACID INDUCIBLE 14)C.G.S.X.
0.012e-136Contig14823_atContig14823--8e-1At1g21350antioxidant/ oxidoreductaseC.G.S.X.
0.012e-136Contig14823_s_atContig14823--8e-1At1g21350antioxidant/ oxidoreductaseC.G.S.X.
0.022e-136Contig24061_atContig24061--3e-1At1g30090kelch repeat-containing F-box family proteinC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.026e+032Arabidopsis thalianaAt5g01840831813OFP1 (OVATE FAMILY PROTEIN 1)Encodes a member of the plant specific ovate protein family. Members of this family have been shown to bind to KNOX and BELL- like TALE class homeodomain proteins. This interaction may mediate relocalization of the TALE homeodomain from the nucleus to the cytoplasm. Functions as a transcriptional repressor that suppresses cell elongation.---C.G.S.X.
0.036e-136Glycine maxGmaAffx.51760.1.S1_atBU577976--2e-1At2g27180unknown proteinC.G.S.X.
0.548e-115414Oryza sativaOs03g0816800AK071618.1-Protein of unknown function DUF567 family protein2e+0At5g27690heavy-metal-associated domain-containing proteinC.G.S.X.
0.032e+034Populus trichocarpaPtpAffx.223113.1.S1_atpmrna40942hypothetical protein-2e+0At4g36740ATHB40 (ARABIDOPSIS THALIANA HOMEOBOX PROTEIN 40)C.G.S.X.
0.043e-240Triticum aestivumTaAffx.57263.1.S1_s_atCD930219--5e+0At4g36900RAP2.10 (related to AP2 10)C.G.S.X.
0.033e-238Vitis vinifera1621405_atCF5179173-deoxy-D-arabino-heptulosonate 7-phosphate synthase-3e-4At1g224102-dehydro-3-deoxyphosphoheptonate aldolase, putative / 3-deoxy-D-arabino-heptulosonate 7-phosphate synthase, putative / DAHP synthetase, putativeC.G.S.X.
0.031e-240Zea maysZm.9376.1.A1_atBM332576--1e+0At5g06330hairpin-responsive protein, putative (HIN1)C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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