Gene omics information

Query gene ID Contig12910_at
Gene name
Organism Hordeum vulgare


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.7187.1Contig12910_atContig12910--1e-1At1g18590SOT17 (SULFOTRANSFERASE 17)S.X.H.G.
0.6784.7Contig3141_atContig3141--2e-27At2g35690ACX5 (ACYL-COA OXIDASE 5)S.X.H.G.
0.5066.9Contig18763_atContig18763--1e-1At5g54860integral membrane transporter family proteinS.X.H.G.
0.5066.9rbaal21e22_x_atrbaal21e22--1e+0At3g61898unknown proteinS.X.H.G.
0.3647.1Contig5840_atContig5840--2e-2At5g23570SGS3 (SUPPRESSOR OF GENE SILENCING 3)S.X.H.G.
0.3342.6Contig11812_atContig11812--2e-1At3g51880HMGB1 (HIGH MOBILITY GROUP B 1)S.X.H.G.
Click here to hide the above table.


Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
20.899.7GSM431547pathogen isolates: Mock - rep2GSE17238Response of barley roots during the host interaction with the plasmodiophorid virus vector Polymyxa graminis
15.399.6GSM431572pathogen isolates: Polymyxa betae - rep2GSE17240Response of barley roots during the non-host interaction with the plasmodiophorid virus vector Polymyxa betae
13.399.4GSM431571pathogen isolates: Polymyxa betae - rep1GSE17240Response of barley roots during the non-host interaction with the plasmodiophorid virus vector Polymyxa betae
12.599.4GSM419979Awn_Rep2GSE16754Comparative transcriptional profiling of organs of the barley spike
12.599.4GSM440970Control awn_Rep2GSE17669Gene expression in the barley spike during drought stress
12.299.4GSM146357Golden Promise Root Control, biological rep1GSE6325Array-based genotyping and expression analysis of barley cv. Maythorpe and Golden Promise
11.999.3GSM146363Maythorpe Root Control, biological rep1GSE6325Array-based genotyping and expression analysis of barley cv. Maythorpe and Golden Promise
10.799.2GSM431569pathogen isolates: Mock inoculated control - rep2GSE17240Response of barley roots during the non-host interaction with the plasmodiophorid virus vector Polymyxa betae
9.899.1GSM146365Maythorpe Root Control, biological rep 3GSE6325Array-based genotyping and expression analysis of barley cv. Maythorpe and Golden Promise
9.699.0GSM431573pathogen isolates: Polymyxa betae - rep3GSE17240Response of barley roots during the non-host interaction with the plasmodiophorid virus vector Polymyxa betae
Click here to hide the above table.


Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.061e-963Contig12075_atContig12075--3e+0At5g07010ST2A (SULFOTRANSFERASE 2A)C.G.S.X.
0.022e-240Contig20492_atContig20492--6e+0At1g02720GATL5 (GALACTURONOSYLTRANSFERASE 5)C.G.S.X.
0.017e-238Contig4206_atContig4206FIDDLEHEAD very long chain fatty acid condensing enzyme FDH;1-like-4e-3At2g26250KCS10 (3-KETOACYL-COA SYNTHASE 10)C.G.S.X.
0.023e-136HA26C03r_atHA26C03r--4e+0At1g23074unknown proteinC.G.S.X.
0.013e-136Contig2837_atContig2837--1e-12At3g23800SBP3 (selenium-binding protein 3)C.G.S.X.
0.013e-136Contig1642_atContig1642--3e-108At5g15650RGP2 (REVERSIBLY GLYCOSYLATED POLYPEPTIDE 2)C.G.S.X.
0.013e-136Contig1633_atContig1633--2e-99At5g15650RGP2 (REVERSIBLY GLYCOSYLATED POLYPEPTIDE 2)C.G.S.X.
0.021e+034rbasd24g02_s_atrbasd24g02--4e+0At5g02090unknown proteinC.G.S.X.
0.021e+034Contig16057_atContig16057--2e+0At5g01530chlorophyll A-B binding protein CP29 (LHCB4)C.G.S.X.
Click here to hide the above table.



Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.021e-138Arabidopsis thalianaAt1g18590838440SOT17 (SULFOTRANSFERASE 17)encodes a desulfoglucosinolate sulfotransferase, involved in the final step of glucosinolate core structure biosynthesis. Has a broad-substrate specificity with preference with methionine-derived desulfoglucosinolates.---C.G.S.X.
0.023e+034Glycine maxPsAffx.C77000008_atPsAffx.C77000008--1e+0At1g10960ATFD1 (FERREDOXIN 1)C.G.S.X.
0.182e-861Oryza sativaOsAffx.17601.1.S1_s_at---0C.G.S.X.
0.022e-138Populus trichocarpaPtpAffx.223098.1.S1_atpmrna40917hypothetical protein-3e+0At5g57410unknown proteinC.G.S.X.
0.760664Triticum aestivumTa.1016.1.S1_atCA648287--6e-1At3g45070sulfotransferase family proteinC.G.S.X.
0.043e+032Vitis vinifera1610983_atCB970564hypothetical LOC100246453-3e-2At1g18590SOT17 (SULFOTRANSFERASE 17)C.G.S.X.
0.021e+034Zea maysZm.17192.1.A1_atBM339467--5e+0At2g22520unknown proteinC.G.S.X.
Click here to hide the above table.


Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
Click here to hide the above table.


Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
Click here to hide the above table.



Back to the CoP portal site

Back to the KAGIANA project homepage