Gene omics information

Query gene ID Contig12821_at
Gene name
Organism Hordeum vulgare


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.3342.6Contig12821_atContig12821--2e+0At3g17680-S.X.H.G.
0.4458.9Contig3114_atContig3114--5e-18At5g46110APE2 (ACCLIMATION OF PHOTOSYNTHESIS TO ENVIRONMENT 2)S.X.H.G.
0.4458.9Contig25479_atContig25479--5e+0At2g19830SNF7.2S.X.H.G.
0.2224.2Contig22900_atContig22900very long chain fatty acid condensing enzyme CUT1;3-like-5e-3At1g17330metal-dependent phosphohydrolase HD domain-containing protein-relatedS.X.H.G.
0.1514.1Contig16406_atContig16406--3e-2At3g15030TCP4 (TCP family transcription factor 4)S.X.H.G.
0.021.8Contig20987_atContig20987--1e-3At4g02610tryptophan synthase, alpha subunit, putativeS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
41.399.9GSM261064Xantha s-46 Control rep3GSE10332Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1
29.299.9GSM1611487% SWC rep3GSE6990Barley drought stress
26.599.8GSM261070Albina f-17 Control rep3GSE10332Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1
16.899.6GSM261061Xantha b-12 Hardened rep3GSE10332Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1
16.199.6GSM71144OWB-R stress replicate 3GSE3170 Barley single feature polymorphisms and drought stress gene expression
15.599.6GSM261076Albina e-16 Control rep3GSE10332Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1
15.599.6GSM71142OWB-R stress replicate 1GSE3170 Barley single feature polymorphisms and drought stress gene expression
15.199.5GSM261067Xantha s-46 Hardened rep3GSE10332Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1
12.599.4GSM238431Embryo 25DAF; Seed development; Rep 2GSE9365Expression data from barley maturing and germinating grains
11.699.3GSM282040Malting_kilned_Morex_rep2GSE11200Expression data from malting barley seeds
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.042e-550HVSMEg0015L13f2_x_atHVSMEg0015L13f2--3e+0At2g39120ubiquitin thiolesteraseC.G.S.X.
0.042e-550HVSMEg0015L13f2_atHVSMEg0015L13f2--3e+0At2g39120ubiquitin thiolesteraseC.G.S.X.
0.023e-136HO14E13S_atHO14E13S--7e-1At1g27250paired amphipathic helix repeat-containing proteinC.G.S.X.
0.021e+034Contig1387_atContig1387--3e-1At5g65400unknown proteinC.G.S.X.
0.011e+034Contig6315_s_atContig6315--3e-9At2g34770FAH1 (FATTY ACID HYDROXYLASE 1)C.G.S.X.
0.021e+034Contig6314_atContig6314--6e-3At2g34770FAH1 (FATTY ACID HYDROXYLASE 1)C.G.S.X.
0.011e+034Contig18045_atContig18045--8e-1At1g15900unknown proteinC.G.S.X.
0.011e+034Contig10787_atContig10787--5e-5At4g27880seven in absentia (SINA) family proteinC.G.S.X.
0.021e+034Contig16695_atContig16695--2e-2At5g20900JAZ12 (JASMONATE-ZIM-DOMAIN PROTEIN 12)C.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.022e+034Arabidopsis thalianaAt3g17680821035-F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;POMBF---C.G.S.X.
0.022e-138Glycine maxPsAffx.CL2107Contig1_atPsAffx.CL2107Contig1--4e+0At1g10030ERG28 (Arabidopsis homolog of yeast ergosterol28)C.G.S.X.
0.025e+034Oryza sativaOs02g0212500AK066275.1-Conserved hypothetical protein1e+0At2g20760protein binding / structural moleculeC.G.S.X.
0.028e-136Populus trichocarpaPtp.3763.1.A1_atDN488246--1e+0At1g15215-C.G.S.X.
0.023e+034Triticum aestivumTaAffx.116000.1.A1_atBQ826576--8e-1At3g0920060S acidic ribosomal protein P0 (RPP0B)C.G.S.X.
0.022e-136Vitis vinifera1616406_atCF610046hypothetical protein LOC100266437-2e-64At1g17720ATB BETAC.G.S.X.
0.023e-136Zea maysZm.14818.1.A1_atCF624634hypothetical protein LOC100276970-4e+0At4g12800PSAL (photosystem I subunit L)C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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