Gene omics information

Query gene ID Contig12796_at
Gene name
Organism Hordeum vulgare


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.5975.8Contig12796_atContig12796--5e-1At5g39110germin-like protein, putativeS.X.H.G.
0.5066.9Contig19125_atContig19125--4e-3At2g33980atnudt22 (Arabidopsis thaliana Nudix hydrolase homolog 22)S.X.H.G.
0.4458.9HZ52M24r_s_atHZ52M24r--4e-3At5g58240bis(5'-adenosyl)-triphosphatase, putativeS.X.H.G.
0.3647.1Contig12503_atContig12503--7e+0At5g54490PBP1 (PINOID-BINDING PROTEIN 1)S.X.H.G.
0.2935.5Contig24660_atContig24660--6e+0Atmg00680-S.X.H.G.
0.1615.3Contig5680_atContig5680--1e-1At4g14540NF-YB3 (NUCLEAR FACTOR Y, SUBUNIT B3)S.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
5.497.5GSM261042before 3 days in mannitol medium rep1GSE10330Transcriptome analysis of barley anthers: effect of mannitol treatment on microspore embryogenesis
4.696.8GSM261070Albina f-17 Control rep3GSE10332Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1
3.895.7GSM261068Albina f-17 Control rep1GSE10332Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1
3.695.3GSM261043before 3 days in mannitol medium rep2GSE10330Transcriptome analysis of barley anthers: effect of mannitol treatment on microspore embryogenesis
3.595.1GSM261044before 3 days in mannitol medium rep3GSE10330Transcriptome analysis of barley anthers: effect of mannitol treatment on microspore embryogenesis
3.595.1GSM261076Albina e-16 Control rep3GSE10332Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1
3.494.8GSM431569pathogen isolates: Mock inoculated control - rep2GSE17240Response of barley roots during the non-host interaction with the plasmodiophorid virus vector Polymyxa betae
3.494.8GSM238413Endosperm 4DAF; Seed development; Rep 2GSE9365Expression data from barley maturing and germinating grains
3.394.6GSM398258Martin_5d_rep1GSE15970Differentially Expressed Genes between Drought-tolerant and Drought-sensitive Barley Genotypes
3.294.3GSM238437Embryo 48 h; Seed germination; Rep 2GSE9365Expression data from barley maturing and germinating grains
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.021e+034Contig12288_atContig12288--1e-1At1g44830AP2 domain-containing transcription factor TINY, putativeC.G.S.X.
0.021e+034Contig10376_s_atContig10376--5e-6At3g08950electron transport SCO1/SenC family proteinC.G.S.X.
0.021e+034Contig10375_atContig10375--5e-7At3g08950electron transport SCO1/SenC family proteinC.G.S.X.
0.011e+034Contig4363_s_atContig4363--6e-26At1g47640unknown proteinC.G.S.X.
0.024e+032Contig17345_atContig17345--6e-3At2g20750ATEXPB1 (ARABIDOPSIS THALIANA EXPANSIN B1)C.G.S.X.
0.014e+032Contig9891_atContig9891--9e-10At5g19150carbohydrate kinase familyC.G.S.X.
0.024e+032HU11F04u_s_atHU11F04u--1e+0At3g07910-C.G.S.X.
0.014e+032Contig11227_atContig11227--6e-1At5g04280glycine-rich RNA-binding proteinC.G.S.X.
0.014e+032Contig10445_atContig10445--4e-2At1g49400emb1129 (embryo defective 1129)C.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.025e-136Arabidopsis thalianaAt5g39110833904germin-like protein, putativeF:manganese ion binding, nutrient reservoir activity;P:biological_process unknown;C:endomembrane system, apoplast;PFO---C.G.S.X.
0.037e-136Glycine maxGmaAffx.28080.1.S1_atBM094868--8e-4At4g22580exostosin family proteinC.G.S.X.
0.272e-76287Oryza sativaOs03g0229600AK072434.1-Maf-like protein family protein9e-11At5g66550Maf family proteinC.G.S.X.
0.037e-136Populus trichocarpaPtpAffx.8685.2.S1_a_atCV245322hypothetical protein-9e-3At5g42770-C.G.S.X.
0.7101352Triticum aestivumTa.10355.1.S1_atBJ307966--7e-1At5g66550Maf family proteinC.G.S.X.
0.032e+032Vitis vinifera1621736_atCB971719hypothetical protein LOC100247202-1e-9At3g08950electron transport SCO1/SenC family proteinC.G.S.X.
0.487e-134476Zea maysZm.4551.1.A1_atCF037057maf-like protein CV_0124-1e-1At5g66550Maf family proteinC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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