Gene omics information

Query gene ID Contig12780_at
Gene name
Organism Hordeum vulgare


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.6784.7Contig12780_atContig12780--5e-1At2g16575unknown proteinS.X.H.G.
0.5572.0rbags1k21_s_atrbags1k21--1e+0Atmg00940-S.X.H.G.
0.4458.9Contig9242_atContig9242--4e-18At3g06430EMB2750 (embryo defective 2750)S.X.H.G.
0.4356.4Contig9243_atContig9243--2e-4At4g27470zinc finger (C3HC4-type RING finger) family proteinS.X.H.G.
0.3647.1Contig6269_atContig6269--1e+1At5g211705'-AMP-activated protein kinase beta-2 subunit, putativeS.X.H.G.
0.1716.9Contig15214_atContig15214--6e+0At4g31441unknown proteinS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
8.698.8GSM238429Embryo 16DAF; Seed development; Rep 2GSE9365Expression data from barley maturing and germinating grains
6.798.3GSM363461Control (C) - rep2GSE14521Late response to boron toxicity in barley leaves
6.598.2GSM6890327 h control replicate3GSE3097Barley1 salinity stress study
6.097.9GSM238428Embryo 16DAF; Seed development; Rep 1GSE9365Expression data from barley maturing and germinating grains
5.797.7GSM16082238% SWC rep3GSE6990Barley drought stress
5.297.4GSM282035Malting_day4_Morex_rep1GSE11200Expression data from malting barley seeds
5.297.4GSM689008 h salt stressed replicate 3GSE3097Barley1 salinity stress study
5.097.2GSM71140OWB-D stress replicate 2GSE3170 Barley single feature polymorphisms and drought stress gene expression
5.097.2GSM16082319% SWC rep1GSE6990Barley drought stress
4.997.1GSM71146OWB-D unstress replicate 2GSE3170 Barley single feature polymorphisms and drought stress gene expression
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.022e-136Contig9798_atContig9798--7e-1At5g59150ATRABA2D (HOARABIDOPSIS RAB GTPASE HOMOLOG A2D)C.G.S.X.
0.039e-134HD07M18r_atHD07M18r--7e-1At3g29370unknown proteinC.G.S.X.
0.039e-134EBro03_SQ004_A01_s_atEBro03_SQ004_A01--1e-11At1g08250ADT6 (arogenate dehydratase 6)C.G.S.X.
0.029e-134Contig5032_atContig5032--4e-1At4g38210ATEXPA20 (ARABIDOPSIS THALIANA EXPANSIN A20)C.G.S.X.
0.029e-134Contig2458_atContig2458--1e-20At3g27090-C.G.S.X.
0.039e-134Contig19911_atContig19911--9e-4At1g14370APK2A (PROTEIN KINASE 2A)C.G.S.X.
0.019e-134Contig3239_atContig3239--3e-3At1g14550anionic peroxidase, putativeC.G.S.X.
0.029e-134Contig2458_s_atContig2458--1e-20At3g27090-C.G.S.X.
0.019e-134Contig2147_atContig2147--4e+0At5g59810SBT5.4C.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.035e-136Arabidopsis thalianaAt2g16575816157unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P---C.G.S.X.
0.036e-136Glycine maxGmaAffx.79024.1.S1_atAW707132--2e-11At2g36320zinc finger (AN1-like) family proteinC.G.S.X.
Os07g06829000.032e-1Oryza sativaOs02g05321009630.m03128--3e-7At5g57620MYB36 (myb domain protein 36)C.G.S.X.
0.033e+034Populus trichocarpaPtpAffx.3442.1.S1_atDN491084--3e-2At4g08330unknown proteinC.G.S.X.
0.032e+034Triticum aestivumTaAffx.107608.1.S1_atCA697486--3e+0At4g27950CRF4 (CYTOKININ RESPONSE FACTOR 4)C.G.S.X.
0.031e-136Vitis vinifera1619968_atCF604378similar to cysteine protease Cp5-3e-2At3g19400cysteine proteinase, putativeC.G.S.X.
0.038e-134Zea maysZm.9523.1.S1_atCO534636--9e-2At4g17615CBL1 (CALCINEURIN B-LIKE PROTEIN 1)C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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