Gene omics information

Query gene ID Contig125_at
Gene name
Organism Hordeum vulgare


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.8092.5Contig125_atContig125--2e+0At4g25720QC (GLUTAMINYL CYCLASE)S.X.H.G.
0.6380.3Contig14753_atContig14753--4e-7At5g38060unknown proteinS.X.H.G.
0.5975.8Contig15156_atContig15156--2e+0At1g48210serine/threonine protein kinase, putativeS.X.H.G.
0.5975.8Contig3633_s_atContig3633--7e-1At3g13480unknown proteinS.X.H.G.
0.3747.9Contig5226_atContig5226--1e-1At1g79790haloacid dehalogenase-like hydrolase family proteinS.X.H.G.
0.3545.1Contig5664_atContig5664--1e-2At1g25450KCS5 (3-KETOACYL-COA SYNTHASE 5)S.X.H.G.
0.1919.6Contig725_s_atContig725--1e-15At1g21750ATPDIL1-1 (PDI-LIKE 1-1)S.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
18.299.7GSM238410Pericarp 8DAF; seed development; Rep 1GSE9365Expression data from barley maturing and germinating grains
12.799.4GSM238424Endosperm 48 h; Seed germination; Rep 1GSE9365Expression data from barley maturing and germinating grains
12.199.3GSM261034Dicktoo-chilling-rep2GSE10329Low temperature stress in cv. Dicktoo
10.199.1GSM238411Pericarp 8DAF; seed development; Rep 2GSE9365Expression data from barley maturing and germinating grains
9.799.0GSM261035Dicktoo-chilling-rep3GSE10329Low temperature stress in cv. Dicktoo
9.699.0GSM238426Endosperm 72 h; Seed germination; Rep 1GSE9365Expression data from barley maturing and germinating grains
9.399.0GSM261036Dicktoo-subzero-rep1GSE10329Low temperature stress in cv. Dicktoo
8.498.8GSM261040Dicktoo-deacclimation-rep2GSE10329Low temperature stress in cv. Dicktoo
7.898.6GSM261033Dicktoo-chilling-rep1GSE10329Low temperature stress in cv. Dicktoo
7.698.6GSM238427Endosperm 72 h; Seed germination; Rep 2GSE9365Expression data from barley maturing and germinating grains
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.570757Contig228_s_atContig228--2e+0At2g39805integral membrane Yip1 family proteinC.G.S.X.
0.484e-157553HT09F22u_s_atHT09F22u--7e-1At4g25720QC (GLUTAMINYL CYCLASE)C.G.S.X.
0.177e-1477Contig438_atContig438--2e+0At5g46160ribosomal protein L14 family protein / huellenlos paralog (HLP)C.G.S.X.
0.032e-136Contig4636_atContig4636--4e+0At4g0081060S acidic ribosomal protein P1 (RPP1B)C.G.S.X.
0.012e-136Contig6854_atContig6854--8e-63At5g62790DXR (1-DEOXY-D-XYLULOSE 5-PHOSPHATE REDUCTOISOMERASE)C.G.S.X.
0.022e-136Contig23211_atContig23211--1e+0At4g25470CBF2 (C-REPEAT/DRE BINDING FACTOR 2)C.G.S.X.
0.022e-136Contig14830_atContig14830--9e+0At5g13780GCN5-related N-acetyltransferase, putativeC.G.S.X.
0.032e-136Contig6804_atContig6804--2e+0At4g15510photosystem II reaction center PsbP family proteinC.G.S.X.
0.029e-134Contig9575_atContig9575--2e+0At3g25855unknown proteinC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.022e+034Arabidopsis thalianaAt4g25720828677QC (GLUTAMINYL CYCLASE)This locus encodes a protein with similarity to gamma-glutamylcyclotransferase that may be involved in catalyzing the formation of pyroglutate residue on proteins that have been post-translationally processed to reveal a glutamine at their N-terminus. Enzymatic assays to test the function of this protein were performed using a truncated form of the protein lacking a signal peptide that is most similar to the AT4G25720.1 protein model.---C.G.S.X.
0.067e-136Glycine maxGma.10830.1.S1_atBE820822--2e-3At1g56580unknown proteinC.G.S.X.
0.361e-132474Oryza sativaOs01g0210600AK060099.1-Protein of unknown function DUF538 family protein5e-1At4g39880ribosomal protein L23 family proteinC.G.S.X.
0.022e-138Populus trichocarpaPtpAffx.222343.1.S1_atpmrna39691hypothetical protein-5e+0At5g5025031 kDa ribonucleoprotein, chloroplast, putative / RNA-binding protein RNP-T, putative / RNA-binding protein 1/2/3, putative / RNA-binding protein cp31, putativeC.G.S.X.
0.690892Triticum aestivumTa.23041.1.S1_atBJ296374--7e+0At4g01410harpin-induced family protein / HIN1 family protein / harpin-responsive family proteinC.G.S.X.
0.052e-756Vitis vinifera1607502_atBQ798644hypothetical protein LOC100265752-5e-3At1g56580unknown proteinC.G.S.X.
0.066e-857Zea maysZm.3523.1.S1_atAY105303.1hypothetical protein LOC100276213-4e-1At1g23060unknown proteinC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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