Gene omics information

Query gene ID Contig12571_at
Gene name
Organism Hordeum vulgare


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.6178.7Contig12571_atContig12571--3e+0At5g37520unknown proteinS.X.H.G.
0.5066.9Contig8129_atContig8129--5e-1At1g23145RALFL2 (RALF-LIKE 2)S.X.H.G.
0.3849.5Contig18916_atContig18916--9e-1At5g09995unknown proteinS.X.H.G.
0.3647.1Contig7870_atContig7870--9e-6At4g39170SEC14 cytosolic factor, putative / phosphoglyceride transfer protein, putativeS.X.H.G.
0.3647.1Contig5709_atContig5709--3e-56At2g30200[acyl-carrier-protein] S-malonyltransferase/ binding / catalytic/ transferaseS.X.H.G.
0.1615.3Contig7966_atContig7966--4e+0At2g42830SHP2 (SHATTERPROOF 2)S.X.H.G.
Click here to hide the above table.


Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
42.499.9GSM419976Palea_Rep2GSE16754Comparative transcriptional profiling of organs of the barley spike
42.499.9GSM440964Control palea_Rep2GSE17669Gene expression in the barley spike during drought stress
22.699.8GSM419977Palea_Rep3GSE16754Comparative transcriptional profiling of organs of the barley spike
22.699.8GSM440965Control palea_Rep3GSE17669Gene expression in the barley spike during drought stress
21.599.8GSM261027ABA-Late-rep1GSE10328ABA experiment
12.499.4GSM261022ABA-Control-rep2GSE10328ABA experiment
11.399.3GSM419975Palea_Rep1GSE16754Comparative transcriptional profiling of organs of the barley spike
11.399.3GSM440963Control palea_Rep1GSE17669Gene expression in the barley spike during drought stress
11.299.2GSM16081938% SWC rep1GSE6990Barley drought stress
11.099.2GSM419973Lemma_Rep2GSE16754Comparative transcriptional profiling of organs of the barley spike
Click here to hide the above table.


Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.075e-961Contig18990_atContig18990--7e+0At5g40600unknown proteinC.G.S.X.
0.041e-654HVSMEn0008D16r2_atHVSMEn0008D16r2--6e-2At2g44290protease inhibitor/seed storage/lipid transfer protein (LTP) family protein (YLS3)C.G.S.X.
0.055e-342HV_CEb0003J19r2_atHV_CEb0003J19r2--4e+0At3g46086unknown proteinC.G.S.X.
0.065e-342Contig15786_atContig15786--1e-4At3g61880CYP78A9 (CYTOCHROME P450 78A9)C.G.S.X.
0.022e-240Contig22174_atContig22174--5e+0Atmg01350-C.G.S.X.
0.022e-240Contig15164_atContig15164--8e-3At4g39950CYP79B2C.G.S.X.
0.028e-238Contig9804_atContig9804--2e-3At3g19910zinc finger (C3HC4-type RING finger) family proteinC.G.S.X.
0.033e-136Contig13834_atContig13834--1e-1At5g04660CYP77A4C.G.S.X.
0.013e-136Contig1717_s_atContig1717--4e-6At3g50980XERO1 (DEHYDRIN XERO 1)C.G.S.X.
Click here to hide the above table.



Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.023e+034Arabidopsis thalianaAt5g37520833730unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PF---C.G.S.X.
0.026e-240Glycine maxPsAffx.C150000036_atPsAffx.C150000036--1e+0At5g58110ATPase activator/ chaperone bindingC.G.S.X.
0.361e-53212Oryza sativaOs10g0317900AK104477.1-Flavonoid 3'-monooxygenase (EC 1.14.13.21)(Flavonoid 3'-hydroxylase) (Cytochrome P450 75B2)3e-1At1g16020unknown proteinC.G.S.X.
0.022e-138Populus trichocarpaPtpAffx.36847.1.A1_atCV276303--3e+0At1g02065SPL8 (SQUAMOSA PROMOTER BINDING PROTEIN-LIKE 8)C.G.S.X.
0.482e-84313Triticum aestivumTaAffx.37978.1.A1_atBJ262045--1e+0At5g19350RNA-binding protein 45 (RBP45), putativeC.G.S.X.
0.023e+032Vitis vinifera1612568_atCF405938similar to Alpha-1,4 glucan phosphorylase L-1 isozyme, chloroplastic/amyloplastic-5e-27At3g29320glucan phosphorylase, putativeC.G.S.X.
0.263e-53208Zea maysZm.10131.1.A1_atBG873885hypothetical protein LOC100273383-3e-1At5g63230-C.G.S.X.
Click here to hide the above table.


Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
Click here to hide the above table.


Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
Click here to hide the above table.



Back to the CoP portal site

Back to the KAGIANA project homepage