Gene omics information

Query gene ID Contig12544_s_at
Gene name
Organism Hordeum vulgare


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.7086.0Contig12544_s_atContig12544--2e+1At5g03100F-box family proteinS.X.H.G.
0.6885.1HVSMEg0004N03r2_atHVSMEg0004N03r2--2e+0At3g50360ATCEN2 (CENTRIN2)S.X.H.G.
0.5975.8HU12B19u_atHU12B19u--3e+0At2g03430ankyrin repeat family proteinS.X.H.G.
0.5874.9HU14H15r_atHU14H15r--6e-2At2g36320zinc finger (AN1-like) family proteinS.X.H.G.
0.5674.3AF474072_CDS-4_atAF474072_CDS-4--1e+0At5g05810ATL43S.X.H.G.
0.5470.3HO09J15S_atHO09J15S--9e+0At5g40630ubiquitin family proteinS.X.H.G.
0.5470.3HVSMEa0012H02f2_atHVSMEa0012H02f2--4e+0At3g02555unknown proteinS.X.H.G.
0.5369.7HM11C20r_atHM11C20r--4e+0At3g55890yippee family proteinS.X.H.G.
0.5268.3EBro08_SQ001_H04_atEBro08_SQ001_H04--1e+1At5g23027unknown proteinS.X.H.G.
0.5268.3Contig1829_atContig1829--1e-2At2g15490UGT73B4 (UDP-GLYCOSYLTRANSFERASE 73B4)S.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
14.199.5GSM261073Albina f-17 Hardened rep3GSE10332Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1
12.399.4GSM261067Xantha s-46 Hardened rep3GSE10332Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1
10.799.2GSM261079Albina e-16 Hardened rep3GSE10332Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1
7.498.5GSM398258Martin_5d_rep1GSE15970Differentially Expressed Genes between Drought-tolerant and Drought-sensitive Barley Genotypes
7.098.4GSM261061Xantha b-12 Hardened rep3GSE10332Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1
6.097.9GSM398256Martin_3d_rep2GSE15970Differentially Expressed Genes between Drought-tolerant and Drought-sensitive Barley Genotypes
5.697.7GSM398257Martin_3d_rep3GSE15970Differentially Expressed Genes between Drought-tolerant and Drought-sensitive Barley Genotypes
5.697.7GSM398259Martin_5d_rep2GSE15970Differentially Expressed Genes between Drought-tolerant and Drought-sensitive Barley Genotypes
5.497.5GSM261071Albina f-17 Hardened rep1GSE10332Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1
5.397.4GSM261070Albina f-17 Control rep3GSE10332Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.9801090Contig12544_atContig12544--2e+1At5g03100F-box family proteinC.G.S.X.
0.282e-90331HO05M15S_atHO05M15S--5e+0At5g05830zinc finger (C3HC4-type RING finger) family proteinC.G.S.X.
0.023e-238Contig14966_atContig14966--7e-23At3g54190-C.G.S.X.
0.031e-136Contig8965_atContig8965--7e+0At5g28010Bet v I allergen family proteinC.G.S.X.
0.021e-136Contig9721_atContig9721UDP-D-glucose epimerase 3-3e+0At4g10960UGE5 (UDP-D-glucose/UDP-D-galactose 4-epimerase 5)C.G.S.X.
0.021e-136Contig7369_atContig7369--4e-3At1g59650CW14C.G.S.X.
0.031e-136Contig3064_atContig3064--6e-1At5g23820MD-2-related lipid recognition domain-containing protein / ML domain-containing proteinC.G.S.X.
0.025e-134Contig7673_atContig7673--2e-7At1g56080unknown proteinC.G.S.X.
0.025e-134Contig15726_atContig15726--6e-1At3g10190calmodulin, putativeC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.022e+130Arabidopsis thalianaAt5g03100831808F-box family proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PM---C.G.S.X.
0.042e+034Glycine maxGmaAffx.12592.1.S1_atBE583480--3e+0At1g37140MCT1 (mei2 C-Terminal RRM only like 1)C.G.S.X.
0.413e-39163Oryza sativaOs04g0436100AK072631.1-Thioesterase superfamily domain containing protein8e+0At1g12900GAPA-2 (GLYCERALDEHYDE 3-PHOSPHATE DEHYDROGENASE A SUBUNIT 2)C.G.S.X.
0.032e-240Populus trichocarpaPtpAffx.903.4.S1_atCA826113hypothetical protein-6e-6At1g04290thioesterase family proteinC.G.S.X.
0.750880Triticum aestivumTa.7861.1.S1_atCD922623--2e+0At3g63010GID1B (GA INSENSITIVE DWARF1B)C.G.S.X.
0.051e+032Vitis vinifera1611578_atCF202927.1--4e+1At4g00585unknown proteinC.G.S.X.
0.421e-56218Zea maysZm.3409.1.S1_atCK369841hypothetical protein LOC100278796-7e+0At1g65483unknown proteinC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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