Gene omics information

Query gene ID Contig12544_at
Gene name
Organism Hordeum vulgare


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.9198.1Contig12544_atContig12544--2e+1At5g03100F-box family proteinS.X.H.G.
0.7388.7Contig10269_atContig10269--7e-13At1g80780CCR4-NOT transcription complex protein, putativeS.X.H.G.
0.7388.7Contig16514_atContig16514--1e+0At2g01590CRR3 (CHLORORESPIRATORY REDUCTION 3)S.X.H.G.
0.6784.7Contig6820_atContig6820--7e-12At4g13350NIG (NSP (NUCLEAR SHUTTLE PROTEIN)-INTERACTING GTPASE)S.X.H.G.
0.5066.9Contig9113_atContig9113--2e-26At5g11980conserved oligomeric Golgi complex component-related / COG complex component-relatedS.X.H.G.
0.2732.1rbags14j23_s_atrbags14j23--6e-1At3g53668CPuORF51 (Conserved peptide upstream open reading frame 51)S.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
6.097.9GSM261061Xantha b-12 Hardened rep3GSE10332Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1
5.297.4GSM261038Dicktoo-subzero-rep3GSE10329Low temperature stress in cv. Dicktoo
5.197.3GSM261067Xantha s-46 Hardened rep3GSE10332Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1
4.897.0GSM261066Xantha s-46 Hardened rep2GSE10332Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1
4.897.0GSM261073Albina f-17 Hardened rep3GSE10332Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1
4.796.9GSM261063Xantha s-46 Control rep2GSE10332Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1
4.696.8GSM261077Albina e-16 Hardened rep1GSE10332Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1
4.696.8GSM261079Albina e-16 Hardened rep3GSE10332Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1
4.496.6GSM261064Xantha s-46 Control rep3GSE10332Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1
3.995.8GSM261059Xantha b-12 Hardened rep1GSE10332Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.9801090Contig12544_s_atContig12544--2e+1At5g03100F-box family proteinC.G.S.X.
0.282e-90331HO05M15S_atHO05M15S--5e+0At5g05830zinc finger (C3HC4-type RING finger) family proteinC.G.S.X.
0.023e-238Contig14966_atContig14966--7e-23At3g54190-C.G.S.X.
0.031e-136Contig8965_atContig8965--7e+0At5g28010Bet v I allergen family proteinC.G.S.X.
0.021e-136Contig9721_atContig9721UDP-D-glucose epimerase 3-3e+0At4g10960UGE5 (UDP-D-glucose/UDP-D-galactose 4-epimerase 5)C.G.S.X.
0.021e-136Contig7369_atContig7369--4e-3At1g59650CW14C.G.S.X.
0.031e-136Contig3064_atContig3064--6e-1At5g23820MD-2-related lipid recognition domain-containing protein / ML domain-containing proteinC.G.S.X.
0.025e-134Contig7673_atContig7673--2e-7At1g56080unknown proteinC.G.S.X.
0.025e-134Contig15726_atContig15726--6e-1At3g10190calmodulin, putativeC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.022e+130Arabidopsis thalianaAt5g03100831808F-box family proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PM---C.G.S.X.
0.042e+034Glycine maxGmaAffx.12592.1.S1_atBE583480--3e+0At1g37140MCT1 (mei2 C-Terminal RRM only like 1)C.G.S.X.
0.413e-39163Oryza sativaOs04g0436100AK072631.1-Thioesterase superfamily domain containing protein8e+0At1g12900GAPA-2 (GLYCERALDEHYDE 3-PHOSPHATE DEHYDROGENASE A SUBUNIT 2)C.G.S.X.
0.032e-240Populus trichocarpaPtpAffx.903.4.S1_atCA826113hypothetical protein-6e-6At1g04290thioesterase family proteinC.G.S.X.
0.750880Triticum aestivumTa.7861.1.S1_atCD922623--2e+0At3g63010GID1B (GA INSENSITIVE DWARF1B)C.G.S.X.
0.051e+032Vitis vinifera1611578_atCF202927.1--4e+1At4g00585unknown proteinC.G.S.X.
0.421e-56218Zea maysZm.3409.1.S1_atCK369841hypothetical protein LOC100278796-7e+0At1g65483unknown proteinC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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