CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Contig12269_s_at

Gene name

Organism Hordeum vulgare

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.80 92.5 Contig12269_s_at Contig12269 - - 8e-10 At4g30850 HHP2 (HEPTAHELICAL TRANSMEMBRANE PROTEIN2) S.X. H.G.
0.53 69.7 Contig4745_at Contig4745 - - 2e+0 At5g37520 unknown protein S.X. H.G.
0.44 58.9 Contig14712_at Contig14712 - - 1e+0 At1g78100 F-box family protein S.X. H.G.
0.43 56.4 Contig13277_at Contig13277 - - 6e+0 At5g42680 unknown protein S.X. H.G.
0.40 53.1 Contig5487_s_at Contig5487 - - 3e-1 At5g65207 unknown protein S.X. H.G.
0.33 42.6 Contig4360_at Contig4360 - - 2e-6 At5g61500 ATG3 S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
11.4 99.3 GSM261042 before 3 days in mannitol medium rep1 GSE10330 Transcriptome analysis of barley anthers: effect of mannitol treatment on microspore embryogenesis
11.2 99.2 GSM261044 before 3 days in mannitol medium rep3 GSE10330 Transcriptome analysis of barley anthers: effect of mannitol treatment on microspore embryogenesis
7.9 98.7 GSM261043 before 3 days in mannitol medium rep2 GSE10330 Transcriptome analysis of barley anthers: effect of mannitol treatment on microspore embryogenesis
6.7 98.3 GSM440962 Stressed lemma_Rep3 GSE17669 Gene expression in the barley spike during drought stress
6.6 98.2 GSM440961 Stressed lemma_Rep2 GSE17669 Gene expression in the barley spike during drought stress
6.3 98.1 GSM261046 after 3 days in mannitol medium rep2 GSE10330 Transcriptome analysis of barley anthers: effect of mannitol treatment on microspore embryogenesis
6.2 98.0 GSM398270 HS41-1_5d_rep1 GSE15970 Differentially Expressed Genes between Drought-tolerant and Drought-sensitive Barley Genotypes
6.2 98.0 GSM261022 ABA-Control-rep2 GSE10328 ABA experiment
6.1 98.0 GSM261021 ABA-Control-rep1 GSE10328 ABA experiment
5.7 97.7 GSM419976 Palea_Rep2 GSE16754 Comparative transcriptional profiling of organs of the barley spike
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.99 0 2724 Contig12269_at Contig12269 - - 8e-10 At4g30850 HHP2 (HEPTAHELICAL TRANSMEMBRANE PROTEIN2) C.G. S.X.
0.12 4e-19 95 Contig12088_at Contig12088 - - 2e-4 At5g20270 HHP1 (HEPTAHELICAL TRANSMEMBRANE PROTEIN1) C.G. S.X.
0.02 2e-5 50 Contig7936_at Contig7936 - - 1e-14 At4g38320 HHP5 (heptahelical protein 5) C.G. S.X.
0.02 2e-2 40 Contig16113_at Contig16113 - - 2e+0 At1g57550 hydrophobic protein, putative / low temperature and salt responsive protein, putative C.G. S.X.
0.02 9e-2 38 EBem10_SQ005_F01_x_at EBem10_SQ005_F01 - - 3e-2 At2g26980 CIPK3 (CBL-INTERACTING PROTEIN KINASE 3) C.G. S.X.
0.01 9e-2 38 Contig8006_at Contig8006 - - 6e-1 At4g13100 zinc finger (C3HC4-type RING finger) family protein C.G. S.X.
0.02 9e-2 38 Contig6363_at Contig6363 - - 8e-2 At2g26980 CIPK3 (CBL-INTERACTING PROTEIN KINASE 3) C.G. S.X.
0.01 3e-1 36 Contig8330_at Contig8330 - - 2e-13 At5g47720 acetyl-CoA C-acyltransferase, putative / 3-ketoacyl-CoA thiolase, putative C.G. S.X.
0.01 3e-1 36 Contig15050_at Contig15050 - - 2e+0 At3g44950 glycine-rich protein C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.07 8e-10 65 Arabidopsis thaliana At4g30850 829209 HHP2 (HEPTAHELICAL TRANSMEMBRANE PROTEIN2) heptahelical transmembrane protein homologous to human adiponectin receptors and progestin receptors - - - C.G. S.X.
0.03 2e-8 61 Glycine max PsAffx.C100000049_at PsAffx.C100000049 - - 3e-1 At4g30850 HHP2 (HEPTAHELICAL TRANSMEMBRANE PROTEIN2) C.G. S.X.
0.46 0 662 Oryza sativa Os02g0179500 AK110722.1 - Hly-III related proteins family protein 8e+0 At5g20270 HHP1 (HEPTAHELICAL TRANSMEMBRANE PROTEIN1) C.G. S.X.
0.03 2e-1 38 Populus trichocarpa Ptp.6432.1.S1_at CK103065 hypothetical protein - 3e-2 At2g24150 HHP3 (heptahelical protein 3) C.G. S.X.
0.05 5e-8 59 Triticum aestivum Ta.26029.1.A1_at CD454796 - - 5e+0 At5g38920 nucleic acid binding / ribonuclease H C.G. S.X.
0.02 8e-1 34 Vitis vinifera 1614549_at CK136881.1 - - 2e-1 At5g46310 WRKY family transcription factor C.G. S.X.
0.05 8e-5 48 Zea mays Zm.17557.1.A1_at CK370056 - - 1e+0 At5g17080 cathepsin-related C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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