Gene omics information

Query gene ID Contig12140_at
Gene name
Organism Hordeum vulgare


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.5975.8Contig12140_atContig12140--4e+0At5g54440unknown proteinS.X.H.G.
0.5066.9Contig9320_atContig9320--2e-1At4g03940unknown proteinS.X.H.G.
0.5066.9Contig18108_atContig18108--2e+0At5g05990mitochondrial glycoprotein family protein / MAM33 family proteinS.X.H.G.
0.5066.9HA06i14r_s_atHA06i14r--8e-4At5g15650RGP2 (REVERSIBLY GLYCOSYLATED POLYPEPTIDE 2)S.X.H.G.
0.4762.2Contig18306_atContig18306--8e-2At3g49270unknown proteinS.X.H.G.
0.4053.1Contig23613_atContig23613--2e-12At3g54030protein kinase family proteinS.X.H.G.
0.3647.1Contig3332_atContig3332--2e-1At3g21215RNA-binding protein, putativeS.X.H.G.
0.2935.5rbaak4i15_s_atrbaak4i15--2e-6At5g08680ATP synthase beta chain, mitochondrial, putativeS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
8.498.8GSM238409Pericarp 4DAF; seed development; Rep 2GSE9365Expression data from barley maturing and germinating grains
8.498.8GSM238408Pericarp 4DAF; seed development; Rep 1GSE9365Expression data from barley maturing and germinating grains
7.998.7GSM238411Pericarp 8DAF; seed development; Rep 2GSE9365Expression data from barley maturing and germinating grains
7.498.5GSM238428Embryo 16DAF; Seed development; Rep 1GSE9365Expression data from barley maturing and germinating grains
6.698.2GSM238410Pericarp 8DAF; seed development; Rep 1GSE9365Expression data from barley maturing and germinating grains
6.698.2GSM238413Endosperm 4DAF; Seed development; Rep 2GSE9365Expression data from barley maturing and germinating grains
6.097.9GSM238429Embryo 16DAF; Seed development; Rep 2GSE9365Expression data from barley maturing and germinating grains
5.897.8GSM238412Endosperm 4DAF; Seed development; Rep 1GSE9365Expression data from barley maturing and germinating grains
4.296.3GSM238438Embryo 72 h; Seed germination; Rep 1GSE9365Expression data from barley maturing and germinating grains
4.196.2GSM146367Maythorpe Root Salt, biological rep 2GSE6325Array-based genotyping and expression analysis of barley cv. Maythorpe and Golden Promise
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.024e-136EBem05_SQ004_I01_atEBem05_SQ004_I01--4e+0At4g30460glycine-rich proteinC.G.S.X.
0.014e-136Contig6547_atContig6547--1e-2At4g23240protein kinase family proteinC.G.S.X.
0.012e+034Contig8196_s_atContig8196--6e-1At3g23245unknown proteinC.G.S.X.
0.012e+034Contig8323_atContig8323--3e+0Atmg00890-C.G.S.X.
0.012e+034Contig5853_atContig5853--3e-1At1g64140-C.G.S.X.
0.012e+034Contig13256_atContig13256--2e+0At1g26210unknown proteinC.G.S.X.
0.012e+034Contig13470_atContig13470--5e-7At1g50840POLGAMMA2 (polymerase gamma 2)C.G.S.X.
0.012e+034Contig11060_atContig11060--4e-30At5g08160ATPK3C.G.S.X.
0.017e+032Contig8527_atContig8527--7e-1At1g80820CCR2 (CINNAMOYL COA REDUCTASE)C.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.024e+034Arabidopsis thalianaAt5g54440835532unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MPFO---C.G.S.X.
0.021e+036Glycine maxGma.14310.1.S1_atCA852848--2e-1At3g26490phototropic-responsive NPH3 family proteinC.G.S.X.
0.4301328Oryza sativaOs12g0554400AK104059.1-Conserved hypothetical protein7e-19At5g54440unknown proteinC.G.S.X.
0.022e-242Populus trichocarpaPtpAffx.214223.1.S1_atpmrna27673hypothetical protein-1e-29At5g11040-C.G.S.X.
0.5401061Triticum aestivumTa.3720.1.A1_a_atCD893627--2e+0At5g66350SHI (SHORT INTERNODES)C.G.S.X.
0.011e+034Vitis vinifera1622210_atCB917686hypothetical protein LOC100264072-3e-1At2g19310-C.G.S.X.
0.012e+034Zea maysZm.2292.1.S1_atAY106626.1hypothetical protein LOC100276186-4e-1At5g62950catalytic/ nucleotide bindingC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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