Gene omics information

Query gene ID Contig12065_at
Gene name
Organism Hordeum vulgare


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.7187.1Contig12065_atContig12065--1e+0At5g61670-S.X.H.G.
0.6784.7Contig7149_atContig7149--7e-1At1g04690KAB1 (POTASSIUM CHANNEL BETA SUBUNIT)S.X.H.G.
0.6784.7Contig6946_atContig6946--1e-5At5g01200myb family transcription factorS.X.H.G.
0.6784.7Contig6329_atContig6329--3e-31At2g40490HEME2S.X.H.G.
0.5066.9Contig8876_atContig8876--2e+0At3g25577unknown proteinS.X.H.G.
0.2630.4Contig11789_atContig11789--2e+0At3g04620nucleic acid bindingS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
10.199.1GSM261072Albina f-17 Hardened rep2GSE10332Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1
9.399.0GSM261077Albina e-16 Hardened rep1GSE10332Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1
8.598.8GSM261071Albina f-17 Hardened rep1GSE10332Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1
7.798.6GSM261067Xantha s-46 Hardened rep3GSE10332Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1
6.798.3GSM261073Albina f-17 Hardened rep3GSE10332Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1
6.598.2GSM261078Albina e-16 Hardened rep2GSE10332Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1
6.198.0GSM261070Albina f-17 Control rep3GSE10332Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1
6.097.9GSM261079Albina e-16 Hardened rep3GSE10332Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1
5.997.9GSM261074Albina e-16 Control rep1GSE10332Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1
5.997.9GSM261066Xantha s-46 Hardened rep2GSE10332Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.027e-134Contig8365_atContig8365--5e-4At5g47760ATPGLP2 (ARABIDOPSIS THALIANA 2-PHOSPHOGLYCOLATE PHOSPHATASE 2)C.G.S.X.
0.027e-134Contig4476_atContig4476--7e-26At5g63620oxidoreductase, zinc-binding dehydrogenase family proteinC.G.S.X.
0.017e-134Contig12886_atContig12886--7e-8At1g71410protein kinase family proteinC.G.S.X.
0.027e-134Contig8365_s_atContig8365--5e-4At5g47760ATPGLP2 (ARABIDOPSIS THALIANA 2-PHOSPHOGLYCOLATE PHOSPHATASE 2)C.G.S.X.
0.023e+032Contig16809_atContig16809--5e+0At4g33020ZIP9C.G.S.X.
0.021e+130Contig11803_atContig11803--2e-6At2g45380-C.G.S.X.
0.011e+130Contig7698_atContig7698--9e-4At3g10770nucleic acid bindingC.G.S.X.
0.021e+130Contig15307_atContig15307--2e+0At3g15357unknown proteinC.G.S.X.
0.021e+130Contig14415_atContig14415--4e-14At3g01490protein kinase, putativeC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.021e+034Arabidopsis thalianaAt5g61670836289-Encodes a close homolog of the Cauliflower OR (Orange) protein. The function of OR is to induce the differentiation of proplastids or other noncolored plastids into chromoplasts for carotenoid accumulation. Both proteins contain a Cysteine-rich zinc finger domain that is highly specific to DnaJ-like molecular chaperons.---C.G.S.X.
0.038e+032Glycine maxHgAffx.4167.2.A1_atCK350781--3e+0At5g10140FLC (FLOWERING LOCUS C)C.G.S.X.
0.252e-62240Oryza sativaOs04g0136900AK067888.1-Conserved hypothetical protein3e+0At2g18140peroxidase, putativeC.G.S.X.
0.032e+034Populus trichocarpaPtpAffx.224114.1.S1_atpmrna42353hypothetical protein-6e-1At4g25830integral membrane family proteinC.G.S.X.
0.097e-1271Triticum aestivumTaAffx.50243.1.S1_atCA744020--4e+0At5g55990CBL2 (CALCINEURIN B-LIKE 2)C.G.S.X.
0.032e+032Vitis vinifera1621706_atCF517374hypothetical protein LOC100242423-2e-11At2g35050protein kinase family proteinC.G.S.X.
0.186e-38157Zea maysZm.14349.1.S1_atCO532249hypothetical protein LOC100272339-3e+0At5g160103-oxo-5-alpha-steroid 4-dehydrogenase family protein / steroid 5-alpha-reductase family proteinC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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