Gene omics information

Query gene ID Contig11980_at
Gene name
Organism Hordeum vulgare


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.8092.5Contig11980_atContig11980--3e-2At3g57920SPL15 (SQUAMOSA PROMOTER BINDING PROTEIN-LIKE 15)S.X.H.G.
0.6784.7Contig5960_atContig5960--1e-16At3g18880ribosomal protein S17 family proteinS.X.H.G.
0.6380.3Contig14126_atContig14126--2e-6At1g65700small nuclear ribonucleoprotein, putative / snRNP, putative / Sm protein, putativeS.X.H.G.
0.5572.0Contig10592_atContig10592--1e-2At5g26180NOL1/NOP2/sun family proteinS.X.H.G.
0.4053.1Contig14103_atContig14103--2e-1At4g19040EDR2S.X.H.G.
0.4053.1Contig11977_atContig11977--6e-1At5g62490ATHVA22BS.X.H.G.
0.3342.6Contig12784_atContig12784--2e-10At1g28520VOZ1 (VASCULAR PLANT ONE ZINC FINGER PROTEIN)S.X.H.G.
0.3342.6Contig7886_atContig7886--8e+0At5g397905'-AMP-activated protein kinase beta-1 subunit-relatedS.X.H.G.
Click here to hide the above table.


Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
12.799.4GSM238409Pericarp 4DAF; seed development; Rep 2GSE9365Expression data from barley maturing and germinating grains
7.598.6GSM146379Maythorpe shoot Salt, biological rep 2GSE6325Array-based genotyping and expression analysis of barley cv. Maythorpe and Golden Promise
7.498.5GSM146371Golden Promise shoot Control, biological rep 3GSE6325Array-based genotyping and expression analysis of barley cv. Maythorpe and Golden Promise
7.298.5GSM146373Golden Promise shoot Salt, biological rep 2GSE6325Array-based genotyping and expression analysis of barley cv. Maythorpe and Golden Promise
6.498.1GSM419978Awn_Rep1GSE16754Comparative transcriptional profiling of organs of the barley spike
6.498.1GSM440969Control awn_Rep1GSE17669Gene expression in the barley spike during drought stress
6.198.0GSM146369Golden Promise shoot Control, biological rep1GSE6325Array-based genotyping and expression analysis of barley cv. Maythorpe and Golden Promise
5.897.8GSM146374Golden Promise shoot Salt, biological rep 3GSE6325Array-based genotyping and expression analysis of barley cv. Maythorpe and Golden Promise
5.597.6GSM146375Maythorpe shoot Control, biological rep1GSE6325Array-based genotyping and expression analysis of barley cv. Maythorpe and Golden Promise
5.297.4GSM419974Lemma_Rep3GSE16754Comparative transcriptional profiling of organs of the barley spike
Click here to hide the above table.


Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.043e-652Contig17977_atContig17977--1e+0At3g52560UEV1D-4 (UBIQUITIN E2 VARIANT 1D-4)C.G.S.X.
0.035e-548Contig9052_atContig9052--1e-4At1g08470strictosidine synthase family proteinC.G.S.X.
0.012e-446Contig7560_atContig7560--5e-53At2g39930ISA1 (ISOAMYLASE 1)C.G.S.X.
0.028e-444Contig10043_atContig10043--8e-38At5g13280AK-LYS1 (ASPARTATE KINASE 1)C.G.S.X.
0.038e-444Contig3187_s_atContig3187--1e+0At1g31410putrescine-binding periplasmic protein-relatedC.G.S.X.
0.038e-444Contig23563_atContig23563--2e+0At2g23930SNRNP-G (PROBABLE SMALL NUCLEAR RIBONUCLEOPROTEIN G)C.G.S.X.
0.033e-342Contig16755_atContig16755--6e+0At4g33100-C.G.S.X.
0.023e-342Contig8771_atContig8771--3e-3At1g45110tetrapyrrole methylase family proteinC.G.S.X.
0.023e-342Contig11021_atContig11021--3e+0At4g22700LBD32 (LOB DOMAIN-CONTAINING PROTEIN 32)C.G.S.X.
Click here to hide the above table.



Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.023e-240Arabidopsis thalianaAt3g57920824961SPL15 (SQUAMOSA PROMOTER BINDING PROTEIN-LIKE 15)Encodes a putative transcriptional regulator that is involved in the vegetative to reproductive phase transition. Expression is regulated by MIR156b.---C.G.S.X.
0.034e-240Glycine maxGma.17501.1.S1_atBG650023--8e-4At3g57920SPL15 (SQUAMOSA PROMOTER BINDING PROTEIN-LIKE 15)C.G.S.X.
0.059e-1065Oryza sativaOs06g0703500AK073179.1-SBP-domain protein 5 (Fragment)2e-2At1g27370squamosa promoter-binding protein-like 10 (SPL10)C.G.S.X.
0.036e-446Populus trichocarpaPtpAffx.108357.1.A1_atCV243662--3e-5At1g27360squamosa promoter-binding protein-like 11 (SPL11)C.G.S.X.
0.530761Triticum aestivumTa.3711.1.S1_atBJ308642--5e-2At1g27360squamosa promoter-binding protein-like 11 (SPL11)C.G.S.X.
0.041e-136Vitis vinifera1614133_atCD711415hypothetical protein LOC100255873-5e-2At1g43800acyl-(acyl-carrier-protein) desaturase, putative / stearoyl-ACP desaturase, putativeC.G.S.X.
0.031e-550Zea maysZm.1066.3.A1_atCO528327SBP domain containing protein-3e-2At5g50570squamosa promoter-binding protein, putativeC.G.S.X.
Click here to hide the above table.


Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
Click here to hide the above table.


Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
Click here to hide the above table.



Back to the CoP portal site

Back to the KAGIANA project homepage