Gene omics information

Query gene ID Contig1186_at
Gene name
Organism Hordeum vulgare


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.9198.1Contig1186_atContig1186--8e+0At5g05120zinc finger (C2H2 type) family proteinS.X.H.G.
0.6178.7Contig1186_s_atContig1186--8e+0At5g05120zinc finger (C2H2 type) family proteinS.X.H.G.
0.4458.9HB04L12r_atHB04L12r--4e+0At5g55360long-chain-alcohol O-fatty-acyltransferase family protein / wax synthase family proteinS.X.H.G.
0.4458.9Contig3042_atContig3042--2e-12At5g25370PLDALPHA3 (PHOSPHLIPASE D ALPHA 3)S.X.H.G.
0.2021.1HVSMEl0020O13r2_s_atHVSMEl0020O13r2--9e+0At5g17150-S.X.H.G.
0.1818.2Contig361_s_atContig361--9e-8At5g20830SUS1 (SUCROSE SYNTHASE 1)S.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
22.299.8GSM238427Endosperm 72 h; Seed germination; Rep 2GSE9365Expression data from barley maturing and germinating grains
12.699.4GSM213443Barley seeds with P. aeruginosa PA5021 mutant for 12hrGSE8618P. aeruginosa virulent factor to barley
12.299.4GSM160464drought control rep1GSE6990Barley drought stress
12.099.3GSM6890127 h control replicate 1GSE3097Barley1 salinity stress study
10.399.1GSM282027Malting_day1_Legacy_rep2GSE11200Expression data from malting barley seeds
9.499.0GSM261038Dicktoo-subzero-rep3GSE10329Low temperature stress in cv. Dicktoo
8.798.9GSM282040Malting_kilned_Morex_rep2GSE11200Expression data from malting barley seeds
8.498.8GSM261032Dicktoo control-rep3GSE10329Low temperature stress in cv. Dicktoo
8.198.7GSM282035Malting_day4_Morex_rep1GSE11200Expression data from malting barley seeds
7.898.6GSM6890227 h control replicate 2GSE3097Barley1 salinity stress study
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.9801893Contig1186_s_atContig1186--8e+0At5g05120zinc finger (C2H2 type) family proteinC.G.S.X.
0.5301037Contig1189_atContig1189--9e+0At4g22820zinc finger (AN1-like) family proteinC.G.S.X.
0.440765Contig1188_s_atContig1188amylase/protease inhibitor-6e+0At5g05120zinc finger (C2H2 type) family proteinC.G.S.X.
0.470751HT11N04r_atHT11N04r--5e+0At5g05120zinc finger (C2H2 type) family proteinC.G.S.X.
0.512e-152537HT07L09u_x_atHT07L09u--1e+1At4g11040protein phosphatase 2C, putative / PP2C, putativeC.G.S.X.
0.489e-146515HT09B02u_x_atHT09B02u--1e+1At5g48790unknown proteinC.G.S.X.
0.252e-51202HT09N01u_atHT09N01u--2e+1At5g58787zinc finger (C3HC4-type RING finger) family proteinC.G.S.X.
0.577e-51200HT10I22u_atHT10I22u--3e+0At5g26720unknown proteinC.G.S.X.
0.052e-446Contig871_s_atContig871--1e+0At4g37530peroxidase, putativeC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.028e+032Arabidopsis thalianaAt5g05120830394zinc finger (C2H2 type) family proteinF:transcription factor activity, zinc ion binding, nucleic acid binding;P:regulation of transcription;C:intracellular;P---C.G.S.X.
0.034e-240Glycine maxPsAffx.C156000016_atPsAffx.C156000016--5e+0At3g10920MSD1 (MANGANESE SUPEROXIDE DISMUTASE 1)C.G.S.X.
0.337e-51202Oryza sativaOs08g0425800AK061339.1-Conserved hypothetical protein2e+0At5g63170GDSL-motif lipase, putativeC.G.S.X.
0.044e-550Populus trichocarpaPtpAffx.31584.1.S1_atCX656162hypothetical protein-2e+0At5g16790-C.G.S.X.
0.492e-179628Triticum aestivumTa.10733.1.A1_atCK215871--2e+0At3g46230ATHSP17.4C.G.S.X.
0.036e-134Vitis vinifera1621636_s_atCF202035.1hypothetical protein LOC100265903-8e-4At2g47730ATGSTF8 (ARABIDOPSIS THALIANA GLUTATHIONE S-TRANSFERASE PHI 8)C.G.S.X.
0.214e-24111Zea maysZm.5086.2.S1_atCK368957hypothetical protein LOC100277068-2e+0At3g13686unknown proteinC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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