Gene omics information

Query gene ID Contig11789_at
Gene name
Organism Hordeum vulgare


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.7187.1Contig11789_atContig11789--2e+0At3g04620nucleic acid bindingS.X.H.G.
0.7187.1Contig2110_atContig2110--1e-2At2g39900LIM domain-containing proteinS.X.H.G.
0.5774.9Contig9797_atContig9797--1e-2At1g23010LPR1 (Low Phosphate Root1)S.X.H.G.
0.5674.3Contig11383_atContig11383--2e+0At4g36560unknown proteinS.X.H.G.
0.4762.2Contig6491_atContig6491--6e-1At5g02230haloacid dehalogenase-like hydrolase family proteinS.X.H.G.
0.4661.0Contig4158_atContig4158--8e-63At1g60780HAP13 (HAPLESS 13)S.X.H.G.
0.3342.6Contig13168_atContig13168--3e+0At5g50130short-chain dehydrogenase/reductase (SDR) family proteinS.X.H.G.
0.2935.5Contig20549_atContig20549--2e-27At2g39480PGP6 (P-GLYCOPROTEIN 6)S.X.H.G.
Click here to hide the above table.


Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
35.099.9GSM372964genotype: Mla6 - pathogen isolates: K1 - time: 16 - rep3GSE14930Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene
31.799.9GSM382234Root_Hg3GSE15295Mercury toxicity in barley roots
30.999.9GSM372963genotype: Mla6 - pathogen isolates: K1 - time: 16 - rep2GSE14930Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene
21.199.7GSM372981genotype: 11542 - pathogen isolates: 5874 - time: 16 - rep2GSE14930Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene
15.199.5GSM372998genotype: 11542 - pathogen isolates: K1 - time: 16 - rep1GSE14930Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene
14.199.5GSM372948genotype: Mla6 - pathogen isolates: 5874 - time: 20 - rep2GSE14930Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene
10.099.1GSM372945genotype: Mla6 - pathogen isolates: 5874 - time: 16 - rep2GSE14930Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene
9.599.0GSM372982genotype: 11542 - pathogen isolates: 5874 - time: 16 - rep3GSE14930Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene
9.499.0GSM372987genotype: 11542 - pathogen isolates: 5874 - time: 24 - rep2GSE14930Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene
8.198.7GSM372999genotype: 11542 - pathogen isolates: K1 - time: 16 - rep2GSE14930Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene
Click here to hide the above table.


Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.404e-123440Contig10193_atContig10193--6e+0At5g59830unknown proteinC.G.S.X.
0.026e-238Contig17751_atContig17751--1e-1At3g49180RID3 (ROOT INITIATION DEFECTIVE 3)C.G.S.X.
0.036e-238Contig22433_atContig22433--5e+0At5g50570squamosa promoter-binding protein, putativeC.G.S.X.
0.022e-136Contig10415_atContig10415--2e+0At5g44570unknown proteinC.G.S.X.
0.022e-136Contig9991_atContig9991--9e-6At1g04250AXR3 (AUXIN RESISTANT 3)C.G.S.X.
0.022e-136Contig12668_s_atContig12668--2e+0At4g29930basic helix-loop-helix (bHLH) family proteinC.G.S.X.
0.022e-136Contig12668_atContig12668--2e+0At4g29930basic helix-loop-helix (bHLH) family proteinC.G.S.X.
0.012e-136Contig7624_s_atContig7624--9e-16At2g27680aldo/keto reductase family proteinC.G.S.X.
0.012e-136Contig7624_atContig7624--9e-16At2g27680aldo/keto reductase family proteinC.G.S.X.
Click here to hide the above table.



Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.032e+034Arabidopsis thalianaAt3g04620819620nucleic acid bindingF:nucleic acid binding;P:biological_process unknown;C:unknown;PO---C.G.S.X.
0.026e-136Glycine maxGmaAffx.60157.1.S1_atCA783613--8e-17At2g25570bindingC.G.S.X.
0.262e-29131Oryza sativaOs01g0841700U95135.1-RPP17-17e-3At5g27560unknown proteinC.G.S.X.
0.021e+132Populus trichocarpaPtpAffx.9854.1.S1_atDN496413--3e+0At5g52700heavy-metal-associated domain-containing proteinC.G.S.X.
0.590658Triticum aestivumTaAffx.16930.1.S1_atBJ283852--2e+0At5g5795026S proteasome regulatory subunit, putativeC.G.S.X.
0.045e-134Vitis vinifera1610013_s_atCF213272hypothetical protein LOC100259835-6e-6At2g26530AR781C.G.S.X.
0.376e-54210Zea maysZm.2005.1.A1_atBM379246elicitor-responsive protein 1-1e-1At5g44568unknown proteinC.G.S.X.
Click here to hide the above table.


Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
Click here to hide the above table.


Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
Click here to hide the above table.



Back to the CoP portal site

Back to the KAGIANA project homepage