CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Contig11709_at

Gene name

Organism Hordeum vulgare

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.50 66.9 Contig11709_at Contig11709 - - 3e-3 At1g22360 AtUGT85A2 (UDP-glucosyl transferase 85A2) S.X. H.G.
0.71 87.1 Contig4470_s_at Contig4470 - - 3e-1 At1g12240 ATBETAFRUCT4 S.X. H.G.
0.60 77.3 Contig7515_at Contig7515 - - 8e-9 At2g43640 signal recognition particle 14 kDa family protein / SRP14 family protein S.X. H.G.
0.53 69.7 Contig16393_at Contig16393 - - 2e-10 At3g54470 uridine 5'-monophosphate synthase / UMP synthase (PYRE-F) (UMPS) S.X. H.G.
0.35 45.1 Contig10961_at Contig10961 - - 2e-1 At1g78260 RNA recognition motif (RRM)-containing protein S.X. H.G.
0.32 40.3 Contig5629_at Contig5629 - - 1e-3 At3g01940 unknown protein S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
45.0 99.9 GSM440972 Stressed awn_Rep1 GSE17669 Gene expression in the barley spike during drought stress
41.4 99.9 GSM372981 genotype: 11542 - pathogen isolates: 5874 - time: 16 - rep2 GSE14930 Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene
23.9 99.8 GSM238422 Endosperm 24 h; Seed germination; Rep 1 GSE9365 Expression data from barley maturing and germinating grains
19.7 99.7 GSM215730 Control (DMSO) treatment rep2 GSE8712 The effects of Yariv-reagent on barley aleurone GA signaling
18.5 99.7 GSM440974 Stressed awn_Rep3 GSE17669 Gene expression in the barley spike during drought stress
14.7 99.5 GSM372987 genotype: 11542 - pathogen isolates: 5874 - time: 24 - rep2 GSE14930 Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene
11.5 99.3 GSM372985 genotype: 11542 - pathogen isolates: 5874 - time: 20 - rep3 GSE14930 Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene
9.9 99.1 GSM372982 genotype: 11542 - pathogen isolates: 5874 - time: 16 - rep3 GSE14930 Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene
9.4 99.0 GSM238434 Embryo 24 h; Seed germination; Rep 1 GSE9365 Expression data from barley maturing and germinating grains
9.4 99.0 GSM373002 genotype: 11542 - pathogen isolates: K1 - time: 20 - rep2 GSE14930 Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.20 9e-45 180 Contig10240_at Contig10240 - - 1e+0 At1g80120 unknown protein C.G. S.X.
0.09 1e-37 157 HS14L06r_at HS14L06r - - 8e-1 At5g12980 rcd1-like cell differentiation protein, putative C.G. S.X.
0.09 3e-17 89 Contig9397_at Contig9397 - - 2e-4 At1g22370 AtUGT85A5 (UDP-glucosyl transferase 85A5) C.G. S.X.
0.11 3e-17 89 HS16J06u_at HS16J06u - - 2e+1 At5g59950 RNA and export factor-binding protein, putative C.G. S.X.
0.19 2e-12 73 Contig14081_at Contig14081 - - 1e-1 At1g22340 AtUGT85A7 (UDP-glucosyl transferase 85A7) C.G. S.X.
0.11 4e-10 65 Contig15712_s_at Contig15712 - - 7e-3 At1g22360 AtUGT85A2 (UDP-glucosyl transferase 85A2) C.G. S.X.
0.11 4e-10 65 Contig15712_at Contig15712 - - 7e-3 At1g22360 AtUGT85A2 (UDP-glucosyl transferase 85A2) C.G. S.X.
0.10 6e-6 52 Contig21253_at Contig21253 - - 2e+1 At5g17165 unknown protein C.G. S.X.
0.04 2e-5 50 HD05F08r_at HD05F08r - - 2e+1 At5g65390 AGP7 C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.02 3e-3 44 Arabidopsis thaliana At1g22360 838843 AtUGT85A2 (UDP-glucosyl transferase 85A2) F:UDP-glycosyltransferase activity, transferase activity, transferring glycosyl groups, glucuronosyltransferase activity;P:metabolic process;C:cellular_component unknown;PMVBOF - - - C.G. S.X.
0.05 3e-7 57 Glycine max GmaAffx.47330.1.S1_at BU926438 - - 2e-1 At4g09840 unknown protein C.G. S.X.
0.44 3e-38 161 Oryza sativa Os02g0578300 AK105275.1 - - 2e-7 At1g22400 UGT85A1 C.G. S.X.
0.03 2e-1 38 Populus trichocarpa PtpAffx.213981.1.S1_at pmrna27244 hypothetical protein - 1e-2 At1g22400 UGT85A1 C.G. S.X.
0.74 0 787 Triticum aestivum Ta.8495.1.A1_at BJ250503 - - 8e-4 At5g66350 SHI (SHORT INTERNODES) C.G. S.X.
0.03 5e-2 38 Vitis vinifera 1608705_at CB972390 hypothetical protein LOC100242998 - 7e-5 At2g43820 UGT74F2 (UDP-GLUCOSYLTRANSFERASE 74F2) C.G. S.X.
0.13 6e-15 81 Zea mays Zm.6272.1.A1_at AY111701.1 - - 4e-2 At1g22360 AtUGT85A2 (UDP-glucosyl transferase 85A2) C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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